| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g04582 | 3:6,381,361-6,383,713 | - | C2H3g06567 | CX3g030874 | LOC_Os03g13200 | Os03g0234900 | - | Detail |
| C1H3g27078 | 3:6,385,206-6,386,919 | - | C2H3g02755 | CX3g029207 | LOC_Os03g13210 | Os03g0235000 | - | Detail |
| C1H3g26089 | 3:6,390,544-6,394,673 | + | C2H3g08839 | CX3g031242 | LOC_Os03g13220 | Os03g0235100 | - | Detail |
| C1H3g13556 | 3:6,395,741-6,397,669 | + | C2H3g17418 | CX3g025226 | LOC_Os03g13230 | Os03g0235200 | - | Detail |
| C1H3g13432 | 3:6,398,079-6,402,321 | - | C2H3g00836 | CX3g028197 | LOC_Os03g13240 | Os03g0235300 | - | Detail |
| C1H3g17503 | 3:6,403,144-6,407,078 | - | C2H3g23746 | CX3g027179 | LOC_Os03g13250 | Os03g0235700 | - | Detail |
| C1H3g27354 | 3:6,408,528-6,414,194 | - | C2H3g02723 | CX3g027179 | LOC_Os03g13274 | Os03g0235900 | - | Detail |
| C1H3g10596 | 3:6,425,260-6,428,167 | + | C2H3g28344 | CX3g025606 | LOC_Os03g13300 | Os03g0236200 | OsGAD3 | Detail |
| C1H3g09841 | 3:6,433,924-6,436,250 | - | C2H3g11740 | CX3g027825 | LOC_Os03g13340 | Os03g0236675 | - | Detail |
| C1H3g26140 | 3:6,437,122-6,437,757 | + | C2H3g20390 | CX3g027924 | LOC_Os03g13360 | Os03g0236800 | - | Detail |
| C1H3g26595 | 3:6,439,268-6,439,918 | + | C2H3g08095 | CX3g026764 | LOC_Os03g13370 | Os03g0236900 | - | Detail |
| C1H3g30353 | 3:6,442,171-6,450,599 | + | C2H3g11238 | CX3g030333 | LOC_Os03g13370 | Os03g0236966 | OsAPC6 | Detail |
| C1H3g16967 | 3:6,452,988-6,457,337 | + | C2H3g29074 | CX3g025761 | LOC_Os03g13380 | Os03g0237000 | - | Detail |
| C1H3g11077 | 3:6,459,492-6,461,434 | + | - | CX3g026598 | LOC_Os03g13390 | Os03g0237100 | - | Detail |
| C1H3g08429 | 3:6,466,345-6,470,824 | - | C2H3g28705 | CX3g027254 | LOC_Os03g13400 | Os03g0237250 | OsIDD14, LPA1 | Detail |
| C1H3g09361 | 3:6,492,558-6,493,100 | + | C2H3g29962 | CX3g028559 | LOC_Os03g13450 | Os03g0237500 | - | Detail |
| C1H3g17244 | 3:6,496,199-6,502,191 | - | C2H3g03025 | CX3g028914 | LOC_Os03g13460 | Os03g0237600 | - | Detail |
| C1H3g24201 | 3:6,508,837-6,512,414 | - | C2H3g23135 | CX3g025055 | LOC_Os03g13480 | Os03g0237950 | - | Detail |
| C1H3g02595 | 3:6,518,226-6,521,431 | - | C2H3g22282 | CX3g025312 | LOC_Os03g13520 | Os03g0238300 | - | Detail |
| C1H3g23768 | 3:6,537,847-6,540,706 | + | C2H3g15172 | CX3g029412 | LOC_Os03g13540 | Os03g0238600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057803 | 9:8,340,375-8,354,069 | - | C1H9g16572 | C2H9g21646 | LOC_Os09g15850 | Os09g0328066 | - | Detail |
| CX9g056706 | 9:8,382,139-8,387,961 | + | C1H9g22823 | C2H9g22970 | LOC_Os09g15840 | Os09g0327600 | - | Detail |
| CX9g055535 | 9:8,389,807-8,391,478 | + | C1H9g18380 | C2H9g08782 | LOC_Os09g15835 | Os09g0327550 | - | Detail |
| CX9g057778 | 9:8,392,302-8,394,412 | + | - | C2H9g17523 | LOC_Os09g15830 | Os09g0327500 | - | Detail |
| CX9g054848 | 9:8,395,572-8,398,920 | + | C1H9g29316 | C2H9g12353 | LOC_Os09g15820 | Os09g0327400 | - | Detail |
| CX9g057213 | 9:8,399,762-8,402,426 | - | C1H9g27818 | C2H9g21061 | LOC_Os09g15810 | Os09g0327300 | - | Detail |
| CX9g056557 | 9:8,404,352-8,408,360 | + | C1H9g14037 | C2H9g12558 | LOC_Os09g15800 | Os09g0327200 | - | Detail |
| CX9g057160 | 9:8,410,185-8,412,082 | + | C1H9g27205 | C2H9g09631 | LOC_Os09g15790 | Os09g0327100 | - | Detail |
| CX9g055621 | 9:8,413,660-8,414,549 | - | C1H9g31109 | C2H9g08878 | LOC_Os09g15780 | Os09g0327000 | - | Detail |
| CX9g055228 | 9:8,418,360-8,419,712 | - | C1H9g09285 | C2H9g24688 | LOC_Os09g15775 | Os09g0326900 | - | Detail |
| CX9g055311 | 9:8,428,065-8,435,880 | - | C1H9g24231 | C2H9g25380 | LOC_Os09g15750 | Os09g0326800 | OsRpn1a | Detail |
| CX9g055191 | 9:8,453,384-8,456,516 | + | C1H9g01463 | C2H9g13951 | LOC_Os09g15700 | Os09g0326100 | - | Detail |
| CX9g056621 | 9:8,460,448-8,462,919 | + | - | C2H9g17262 | - | - | - | Detail |
| CX9g056384 | 9:8,465,800-8,466,870 | - | C1H9g06365 | C2H9g24883 | LOC_Os09g15670 | Os09g0325700 | PP2C1, OsPP2C1, OsSIPP2C1, OsPP2C68, PP2C68, OsPP108 | Detail |
| CX9g055208 | 9:8,474,859-8,475,108 | + | - | - | - | - | - | Detail |
| CX9g056870 | 9:8,489,952-8,490,191 | - | - | - | - | - | - | Detail |
| CX9g056577 | 9:8,502,963-8,506,792 | - | C1H9g22857 | C2H9g15142 | LOC_Os09g15540 | Os09g0324300 | - | Detail |
| CX9g057572 | 9:8,508,954-8,509,430 | - | - | C2H9g12849 | LOC_Os09g15520 | Os09g0324000 | - | Detail |
| CX9g055980 | 9:8,516,644-8,517,725 | + | C1H9g26563 | C2H9g30451 | LOC_Os09g15510 | Os09g0323700 | - | Detail |
| CX9g057171 | 9:8,524,467-8,525,538 | - | C1H9g26563 | C2H9g24164 | LOC_Os09g15500 | Os09g0323700 | - | Detail |