| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g21298 | 5:24,370,851-24,378,723 | + | C1H5g11375 | CX5g040394 | LOC_Os05g50660 | Os05g0583500 | - | Detail |
| C2H5g22702 | 5:24,384,080-24,385,033 | + | C1H5g12339 | CX5g040044 | LOC_Os05g44090 | Os05g0583600 | - | Detail |
| C2H5g01078 | 5:24,388,586-24,389,818 | - | C1H5g13782 | CX5g040015 | LOC_Os05g50690 | Os05g0583950 | - | Detail |
| C2H5g06430 | 5:24,392,259-24,393,420 | + | C1H5g25754 | CX5g040625 | LOC_Os05g50700 | Os05g0183100 | OsWRKY67 | Detail |
| C2H5g22409 | 5:24,395,708-24,396,278 | - | C1H5g23722 | CX5g038552 | LOC_Os05g50710 | Os05g0584200 | - | Detail |
| C2H5g01350 | 5:24,397,473-24,398,219 | + | C1H5g29939 | CX5g037414 | LOC_Os05g50720 | Os05g0584300 | - | Detail |
| C2H5g11315 | 5:24,403,610-24,404,565 | - | C1H5g06457 | CX5g040723 | LOC_Os05g50730 | Os05g0584400 | - | Detail |
| C2H5g01570 | 5:24,409,676-24,414,803 | - | C1H5g14305 | CX5g037383 | LOC_Os05g50750 | Os05g0584600 | - | Detail |
| C2H5g08711 | 5:24,442,120-24,444,358 | + | C1H5g05102 | CX5g039086 | LOC_Os05g50770 | Os05g0584900 | - | Detail |
| C2H5g19125 | 5:24,451,398-24,453,724 | + | C1H5g03901 | CX5g036814 | LOC_Os05g50800 | Os05g0585400 | - | Detail |
| C2H5g30392 | 5:24,454,334-24,458,461 | - | C1H5g16468 | CX5g039624 | LOC_Os05g50810 | Os05g0585500 | OsCPK15 | Detail |
| C2H5g27655 | 5:24,460,511-24,461,197 | + | C1H5g19912 | - | LOC_Os05g50815 | Os05g0580900 | - | Detail |
| C2H5g10246 | 5:24,463,816-24,466,422 | - | C1H5g12424 | CX5g039076 | LOC_Os05g50820 | Os05g0585700 | - | Detail |
| C2H5g21671 | 5:24,469,908-24,471,983 | + | C1H5g08867 | CX5g037322 | LOC_Os05g50830 | Os05g0585800 | - | Detail |
| C2H5g07511 | 5:24,472,142-24,476,832 | - | C1H5g02224 | CX5g039391 | LOC_Os05g50840 | Os05g0585900 | - | Detail |
| C2H5g12537 | 5:24,499,027-24,504,297 | + | C1H5g05725 | CX5g037391 | LOC_Os05g50890 | Os05g0586200 | OsGH3-5, OsGH3.5, OsJAR1, JAR1 | Detail |
| C2H5g22033 | 5:24,507,189-24,509,328 | - | C1H5g23433 | CX5g040329 | LOC_Os05g50900 | Os05g0586300 | OsFAMA | Detail |
| C2H5g28495 | 5:24,513,017-24,518,798 | + | C1H5g03676 | CX5g037684 | LOC_Os05g50910 | Os05g0586400 | - | Detail |
| C2H5g17335 | 5:24,520,464-24,523,154 | + | C1H5g31726 | CX5g037746 | LOC_Os05g50920 | Os05g0586500 | - | Detail |
| C2H5g13829 | 5:24,524,099-24,528,487 | + | C1H5g23972 | CX5g037636 | LOC_Os05g50940 | Os05g0586700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055556 | 9:7,934,942-7,936,461 | - | C1H9g06883 | C2H9g26718 | LOC_Os09g16590 | Os09g0339000 | - | Detail |
| CX9g056054 | 9:7,959,669-7,961,972 | + | C1H9g08185 | C2H9g08792 | LOC_Os09g16550 | Os09g0334900 | - | Detail |
| CX9g056154 | 9:7,963,273-7,966,505 | - | C1H9g02774 | C2H9g13074 | LOC_Os09g16540 | Os09g0334800 | - | Detail |
| CX9g056487 | 9:7,977,438-7,977,950 | + | C1H9g01191 | C2H9g18190 | LOC_Os09g16520 | Os09g0334600 | - | Detail |
| CX9g056065 | 9:7,979,868-7,981,489 | - | C1H9g09036 | C2H9g25170 | LOC_Os09g16510 | Os09g0334500 | WRKY74, OsWRKY74 | Detail |
| CX9g056750 | 9:8,030,525-8,038,514 | + | C1H9g26841 | C2H9g00499 | LOC_Os09g16449 | Os09g0333500 | OsPDR18, ABCG52 | Detail |
| CX9g055804 | 9:8,081,034-8,081,776 | + | - | - | - | - | - | Detail |
| CX9g056847 | 9:8,109,974-8,118,524 | + | C1H9g10386 | C2H9g07195 | LOC_Os09g16330 | Os09g0332700 | OsPDR20 | Detail |
| CX9g056308 | 9:8,159,688-8,160,200 | - | - | C2H9g09506 | LOC_Os09g16280 | Os09g0332100 | - | Detail |
| CX9g057842 | 9:8,167,783-8,170,315 | + | C1H9g03673 | C2H9g04185 | LOC_Os09g16260 | Os09g0331900 | - | Detail |
| CX9g054859 | 9:8,179,733-8,185,196 | + | C1H9g02563 | C2H9g23346 | LOC_Os09g16240 | Os09g0331600 | - | Detail |
| CX9g058030 | 9:8,216,102-8,216,497 | - | - | C2H9g07479 | LOC_Os09g16150 | - | - | Detail |
| CX9g058143 | 9:8,245,248-8,245,637 | - | - | - | - | - | - | Detail |
| CX9g056743 | 9:8,257,328-8,262,383 | - | C1H9g29313 | C2H9g03814 | LOC_Os09g16160 | Os09g0330700 | - | Detail |
| CX9g056395 | 9:8,262,598-8,262,750 | + | - | - | - | Os01g0728000 | - | Detail |
| CX9g058128 | 9:8,281,773-8,283,209 | + | C1H9g06647 | C2H9g08394 | LOC_Os09g16110 | Os09g0330000 | - | Detail |
| CX9g055579 | 9:8,293,512-8,294,987 | + | C1H9g19473 | C2H9g21003 | LOC_Os09g16030 | Os09g0329200 | - | Detail |
| CX9g055526 | 9:8,307,396-8,309,441 | - | - | C2H9g28887 | LOC_Os09g16010 | Os09g0329000 | - | Detail |
| CX9g055286 | 9:8,310,100-8,313,915 | - | C1H9g22823 | C2H9g23934 | LOC_Os09g16000 | Os09g0328951 | Pi56(t) | Detail |
| CX9g055473 | 9:8,320,387-8,326,152 | + | C1H9g29313 | C2H9g21414 | LOC_Os09g15950 | Os09g0328600 | - | Detail |