| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19435 | 4:22,521,930-22,525,097 | + | C1H4g14520 | CX4g031957 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| C2H4g18486 | 4:22,525,268-22,525,756 | - | - | - | - | Os04g0521900 | - | Detail |
| C2H4g20077 | 4:22,534,017-22,534,349 | + | C1H4g13540 | CX4g034351 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| C2H4g17950 | 4:22,544,733-22,545,482 | - | C1H4g14130 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H4g23320 | 4:22,547,687-22,548,330 | - | C1H4g20746 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H4g07715 | 4:22,569,851-22,572,962 | + | C1H4g23550 | CX4g032754 | LOC_Os04g44190 | Os04g0522800 | - | Detail |
| C2H4g09820 | 4:22,574,353-22,575,002 | + | C1H4g25974 | CX4g032876 | LOC_Os04g44200 | Os04g0523000 | - | Detail |
| C2H4g17435 | 4:22,575,109-22,580,142 | - | C1H4g18322 | CX4g032188 | LOC_Os04g44210 | Os04g0523100 | - | Detail |
| C2H4g30482 | 4:22,586,419-22,588,702 | - | C1H4g27685 | CX4g033622 | LOC_Os04g44220 | Os04g0523200 | - | Detail |
| C2H4g08365 | 4:22,590,483-22,590,956 | - | C1H4g26193 | CX4g033622 | LOC_Os04g44220 | Os04g0523350 | - | Detail |
| C2H4g19772 | 4:22,595,491-22,595,874 | - | - | CX4g035364 | - | - | - | Detail |
| C2H4g21642 | 4:22,598,615-22,604,413 | + | C1H4g02749 | CX4g033677 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| C2H4g25107 | 4:22,607,303-22,608,808 | - | C1H4g16494 | CX4g034590 | LOC_Os04g44240 | Os04g0523600 | - | Detail |
| C2H4g28789 | 4:22,611,650-22,615,059 | - | C1H4g13330 | - | LOC_Os04g51490 | Os04g0132900 | - | Detail |
| C2H4g13084 | 4:22,618,354-22,620,895 | - | C1H4g19013 | CX4g035815 | LOC_Os01g62100 | - | - | Detail |
| C2H4g14631 | 4:22,624,546-22,626,720 | - | C1H4g16494 | CX4g034590 | LOC_Os04g44250 | Os04g0523600 | - | Detail |
| C2H4g00229 | 4:22,627,770-22,628,705 | + | - | - | LOC_Os04g44260 | Os04g0524136 | - | Detail |
| C2H4g21424 | 4:22,634,411-22,635,207 | + | C1H4g20304 | CX4g035143 | LOC_Os04g44280 | Os04g0524300 | RR5, rr5, OsRR5, Rra4, OsRRA4 | Detail |
| C2H4g00588 | 4:22,658,904-22,661,183 | + | C1H4g10194 | CX4g034041 | LOC_Os04g44290 | Os04g0524400 | - | Detail |
| C2H4g16476 | 4:22,662,716-22,666,298 | - | C1H4g06080 | CX4g031624 | LOC_Os04g44300 | Os04g0524500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006437 | 1:29,889,782-29,892,959 | + | C1H1g29242 | C2H1g18114 | LOC_Os01g57740 | Os01g0787400 | - | Detail |
| CX1g000958 | 1:29,899,624-29,904,712 | + | C1H1g15970 | C2H1g16467 | LOC_Os01g57770 | Os01g0787600 | - | Detail |
| CX1g003160 | 1:29,908,188-29,908,752 | + | C1H1g30906 | C2H1g05078 | - | Os01g0788200 | - | Detail |
| CX1g004660 | 1:29,913,535-29,918,401 | + | C1H1g10008 | C2H1g15125 | LOC_Os01g57854 | Os01g0788400 | OsPME1 | Detail |
| CX1g002342 | 1:29,919,185-29,921,791 | - | C1H1g01725 | C2H1g08239 | LOC_Os01g57870 | Os01g0788500 | - | Detail |
| CX1g000253 | 1:29,928,446-29,929,847 | + | C1H1g30471 | C2H1g26357 | LOC_Os01g57880 | Os01g0788700 | - | Detail |
| CX1g006656 | 1:29,933,791-29,937,768 | + | C1H1g27288 | C2H1g03626 | LOC_Os01g57890 | Os01g0788800 | OSTF1 | Detail |
| CX1g003498 | 1:29,939,092-29,941,104 | - | C1H1g00973 | C2H1g11812 | LOC_Os01g57900 | Os01g0788900 | - | Detail |
| CX1g001149 | 1:29,944,403-29,945,991 | - | C1H1g09026 | C2H1g25149 | LOC_Os01g57910 | Os01g0788950 | - | Detail |
| CX1g000250 | 1:29,946,588-29,948,591 | - | C1H1g03302 | C2H1g28490 | LOC_Os01g57920 | Os01g0789000 | - | Detail |
| CX1g003821 | 1:29,951,457-29,954,559 | - | C1H1g02335 | C2H1g02068 | LOC_Os01g57930 | Os01g0789100 | - | Detail |
| CX1g004326 | 1:29,956,135-29,957,910 | + | C1H1g09857 | C2H1g28667 | LOC_Os01g57940 | Os01g0789200 | - | Detail |
| CX1g001669 | 1:29,959,482-29,961,382 | - | C1H1g08159 | C2H1g05555 | LOC_Os01g58070 | Os01g0793100 | - | Detail |
| CX1g002006 | 1:29,965,163-29,966,335 | + | C1H1g00365 | C2H1g29383 | LOC_Os01g58080 | Os01g0793200 | - | Detail |
| CX1g003912 | 1:29,971,746-29,976,366 | - | C1H1g11361 | C2H1g29186 | LOC_Os01g58100 | Os01g0793300 | - | Detail |
| CX1g006007 | 1:29,980,184-29,984,833 | - | C1H1g17382 | C2H1g23821 | LOC_Os01g58114 | Os01g0793500 | - | Detail |
| CX1g006998 | 1:29,991,252-29,991,590 | - | C1H1g05353 | C2H5g05803 | LOC_Os01g58130 | Os01g0793800 | - | Detail |
| CX1g001752 | 1:29,997,422-29,997,742 | - | C1H1g19709 | C2H5g05803 | LOC_Os01g58140 | Os01g0793900 | - | Detail |
| CX1g005671 | 1:30,001,662-30,002,006 | - | C1H1g02015 | C2H5g05803 | LOC_Os01g58150 | Os01g0794100 | - | Detail |
| CX1g000505 | 1:30,023,698-30,026,314 | + | C1H1g08455 | C2H1g16569 | LOC_Os01g58194 | Os01g0794400 | - | Detail |