| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g20617 | 3:29,621,352-29,624,320 | - | C1H3g23563 | CX3g025581 | LOC_Os03g56790 | Os03g0780400 | OsADF2 | Detail |
| C2H3g18001 | 3:29,626,391-29,631,401 | + | C1H3g23600 | CX3g026219 | LOC_Os03g56800 | Os03g0780500 | - | Detail |
| C2H3g14864 | 3:29,631,995-29,635,002 | + | C1H3g17595 | CX3g030860 | LOC_Os03g56810 | Os03g0780600 | - | Detail |
| C2H3g09626 | 3:29,635,110-29,639,573 | + | - | - | - | - | - | Detail |
| C2H3g16433 | 3:29,641,852-29,643,226 | + | C1H3g26439 | CX3g026170 | LOC_Os03g56820 | Os03g0780800 | - | Detail |
| C2H3g03306 | 3:29,644,727-29,647,250 | - | C1H3g14922 | CX3g028624 | LOC_Os03g56830 | Os03g0780900 | - | Detail |
| C2H3g10423 | 3:29,649,468-29,652,876 | - | C1H3g04528 | CX3g030035 | LOC_Os03g56840 | Os03g0781000 | - | Detail |
| C2H3g00662 | 3:29,654,033-29,656,588 | + | C1H3g00697 | CX3g028006 | LOC_Os03g56850 | Os03g0781100 | - | Detail |
| C2H3g16006 | 3:29,658,702-29,659,389 | - | C1H3g00675 | CX3g031346 | LOC_Os03g56860 | Os03g0781300 | - | Detail |
| C2H3g09130 | 3:29,660,283-29,662,126 | - | C1H3g13066 | CX3g029784 | LOC_Os03g56869 | Os03g0781400 | - | Detail |
| C2H3g00286 | 3:29,664,701-29,668,083 | - | C1H3g04826 | CX3g025012 | LOC_Os03g56890 | Os03g0781600 | - | Detail |
| C2H3g19846 | 3:29,687,604-29,690,478 | + | C1H3g18147 | CX3g026212 | LOC_Os03g56950 | Os03g0782500 | PIL13, OsPIL1, OsPIL13, OsbHLH152 | Detail |
| C2H3g26278 | 3:29,697,094-29,699,728 | - | C1H3g10536 | CX3g026808 | LOC_Os03g56960 | Os03g0782900 | - | Detail |
| C2H3g17813 | 3:29,699,849-29,705,182 | + | C1H3g29435 | CX3g030659 | LOC_Os03g56970 | Os03g0783000 | - | Detail |
| C2H3g21267 | 3:29,717,486-29,720,085 | + | C1H3g09935 | - | LOC_Os03g56490 | Os03g0783100 | - | Detail |
| C2H3g27771 | 3:29,721,321-29,721,893 | + | C1H3g22666 | - | LOC_Os03g57010 | Os03g0783100 | - | Detail |
| C2H3g11026 | 3:29,763,753-29,765,490 | - | C1H3g16399 | CX3g026130 | LOC_Os03g57040 | Os03g0783700 | - | Detail |
| C2H3g20647 | 3:29,771,887-29,775,333 | + | C1H3g28995 | CX3g025168 | LOC_Os03g57070 | Os03g0784000 | - | Detail |
| C2H3g12289 | 3:29,780,651-29,782,256 | - | C1H3g19825 | CX3g027646 | LOC_Os03g57080 | Os03g0784100 | - | Detail |
| C2H3g18782 | 3:29,791,176-29,793,796 | - | C1H3g16412 | - | LOC_Os03g57090 | Os03g0784300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006437 | 1:29,889,782-29,892,959 | + | C1H1g29242 | C2H1g18114 | LOC_Os01g57740 | Os01g0787400 | - | Detail |
| CX1g000958 | 1:29,899,624-29,904,712 | + | C1H1g15970 | C2H1g16467 | LOC_Os01g57770 | Os01g0787600 | - | Detail |
| CX1g003160 | 1:29,908,188-29,908,752 | + | C1H1g30906 | C2H1g05078 | - | Os01g0788200 | - | Detail |
| CX1g004660 | 1:29,913,535-29,918,401 | + | C1H1g10008 | C2H1g15125 | LOC_Os01g57854 | Os01g0788400 | OsPME1 | Detail |
| CX1g002342 | 1:29,919,185-29,921,791 | - | C1H1g01725 | C2H1g08239 | LOC_Os01g57870 | Os01g0788500 | - | Detail |
| CX1g000253 | 1:29,928,446-29,929,847 | + | C1H1g30471 | C2H1g26357 | LOC_Os01g57880 | Os01g0788700 | - | Detail |
| CX1g006656 | 1:29,933,791-29,937,768 | + | C1H1g27288 | C2H1g03626 | LOC_Os01g57890 | Os01g0788800 | OSTF1 | Detail |
| CX1g003498 | 1:29,939,092-29,941,104 | - | C1H1g00973 | C2H1g11812 | LOC_Os01g57900 | Os01g0788900 | - | Detail |
| CX1g001149 | 1:29,944,403-29,945,991 | - | C1H1g09026 | C2H1g25149 | LOC_Os01g57910 | Os01g0788950 | - | Detail |
| CX1g000250 | 1:29,946,588-29,948,591 | - | C1H1g03302 | C2H1g28490 | LOC_Os01g57920 | Os01g0789000 | - | Detail |
| CX1g003821 | 1:29,951,457-29,954,559 | - | C1H1g02335 | C2H1g02068 | LOC_Os01g57930 | Os01g0789100 | - | Detail |
| CX1g004326 | 1:29,956,135-29,957,910 | + | C1H1g09857 | C2H1g28667 | LOC_Os01g57940 | Os01g0789200 | - | Detail |
| CX1g001669 | 1:29,959,482-29,961,382 | - | C1H1g08159 | C2H1g05555 | LOC_Os01g58070 | Os01g0793100 | - | Detail |
| CX1g002006 | 1:29,965,163-29,966,335 | + | C1H1g00365 | C2H1g29383 | LOC_Os01g58080 | Os01g0793200 | - | Detail |
| CX1g003912 | 1:29,971,746-29,976,366 | - | C1H1g11361 | C2H1g29186 | LOC_Os01g58100 | Os01g0793300 | - | Detail |
| CX1g006007 | 1:29,980,184-29,984,833 | - | C1H1g17382 | C2H1g23821 | LOC_Os01g58114 | Os01g0793500 | - | Detail |
| CX1g006998 | 1:29,991,252-29,991,590 | - | C1H1g05353 | C2H5g05803 | LOC_Os01g58130 | Os01g0793800 | - | Detail |
| CX1g001752 | 1:29,997,422-29,997,742 | - | C1H1g19709 | C2H5g05803 | LOC_Os01g58140 | Os01g0793900 | - | Detail |
| CX1g005671 | 1:30,001,662-30,002,006 | - | C1H1g02015 | C2H5g05803 | LOC_Os01g58150 | Os01g0794100 | - | Detail |
| CX1g000505 | 1:30,023,698-30,026,314 | + | C1H1g08455 | C2H1g16569 | LOC_Os01g58194 | Os01g0794400 | - | Detail |