| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g23173 | 4:20,134,233-20,137,730 | + | C2H4g15046 | CX4g031560 | LOC_Os04g38870 | Os04g0462500 | - | Detail |
| C1H4g05269 | 4:20,138,431-20,140,481 | - | C2H4g09025 | CX4g033001 | LOC_Os04g38880 | Os04g0462600 | - | Detail |
| C1H4g30627 | 4:20,146,849-20,147,703 | - | C2H4g27908 | CX4g034025 | LOC_Os04g38900 | Os04g0462900 | - | Detail |
| C1H4g28569 | 4:20,149,829-20,152,398 | - | C2H4g10984 | CX4g032418 | LOC_Os04g38910 | Os04g0463000 | - | Detail |
| C1H4g14030 | 4:20,158,006-20,158,918 | - | - | - | - | - | - | Detail |
| C1H4g28377 | 4:20,163,434-20,164,307 | - | C2H4g23255 | CX4g034571 | LOC_Os09g23300 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C1H4g31445 | 4:20,165,453-20,165,896 | - | C2H4g07912 | CX4g034571 | LOC_Os04g38940 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C1H4g09561 | 4:20,169,229-20,172,624 | - | C2H4g28763 | CX4g036538 | LOC_Os04g38950 | Os04g0463500 | TDD1, OASB1 | Detail |
| C1H4g11967 | 4:20,174,541-20,177,039 | + | C2H4g28177 | CX4g033159 | LOC_Os04g38960 | Os04g0463600 | - | Detail |
| C1H4g05080 | 4:20,179,690-20,181,500 | - | C2H4g13162 | CX4g033067 | LOC_Os04g38970 | Os04g0463700 | - | Detail |
| C1H4g02516 | 4:20,181,910-20,188,388 | - | C2H4g07932 | CX4g036672 | LOC_Os04g38980 | Os04g0463800 | - | Detail |
| C1H4g21091 | 4:20,199,235-20,199,681 | - | - | - | - | - | - | Detail |
| C1H4g01794 | 4:20,200,816-20,205,566 | - | C2H4g13985 | CX4g032487 | LOC_Os04g39020 | Os04g0464200 | BAD1, Badh1, badh1, BAD1, BADH1, OsBADH1, BADH | Detail |
| C1H4g07451 | 4:20,208,347-20,212,309 | - | C2H4g00984 | CX4g035491 | LOC_Os04g39030 | Os04g0464400 | - | Detail |
| C1H4g23214 | 4:20,215,020-20,219,987 | + | C2H4g04170 | CX4g031502 | LOC_Os04g39040 | Os04g0464500 | - | Detail |
| C1H4g17346 | 4:20,223,164-20,223,448 | - | C2H4g17707 | - | - | - | - | Detail |
| C1H4g20578 | 4:20,230,246-20,230,536 | - | C2H4g26653 | CX4g036034 | - | - | - | Detail |
| C1H4g22118 | 4:20,242,943-20,249,032 | - | C2H4g00542 | CX4g035608 | LOC_Os04g39060 | Os04g0464800 | OsCFM2 | Detail |
| C1H4g16307 | 4:20,253,424-20,254,077 | - | C2H4g07256 | - | - | Os07g0567801 | - | Detail |
| C1H4g10402 | 4:20,258,867-20,259,130 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006437 | 1:29,889,782-29,892,959 | + | C1H1g29242 | C2H1g18114 | LOC_Os01g57740 | Os01g0787400 | - | Detail |
| CX1g000958 | 1:29,899,624-29,904,712 | + | C1H1g15970 | C2H1g16467 | LOC_Os01g57770 | Os01g0787600 | - | Detail |
| CX1g003160 | 1:29,908,188-29,908,752 | + | C1H1g30906 | C2H1g05078 | - | Os01g0788200 | - | Detail |
| CX1g004660 | 1:29,913,535-29,918,401 | + | C1H1g10008 | C2H1g15125 | LOC_Os01g57854 | Os01g0788400 | OsPME1 | Detail |
| CX1g002342 | 1:29,919,185-29,921,791 | - | C1H1g01725 | C2H1g08239 | LOC_Os01g57870 | Os01g0788500 | - | Detail |
| CX1g000253 | 1:29,928,446-29,929,847 | + | C1H1g30471 | C2H1g26357 | LOC_Os01g57880 | Os01g0788700 | - | Detail |
| CX1g006656 | 1:29,933,791-29,937,768 | + | C1H1g27288 | C2H1g03626 | LOC_Os01g57890 | Os01g0788800 | OSTF1 | Detail |
| CX1g003498 | 1:29,939,092-29,941,104 | - | C1H1g00973 | C2H1g11812 | LOC_Os01g57900 | Os01g0788900 | - | Detail |
| CX1g001149 | 1:29,944,403-29,945,991 | - | C1H1g09026 | C2H1g25149 | LOC_Os01g57910 | Os01g0788950 | - | Detail |
| CX1g000250 | 1:29,946,588-29,948,591 | - | C1H1g03302 | C2H1g28490 | LOC_Os01g57920 | Os01g0789000 | - | Detail |
| CX1g003821 | 1:29,951,457-29,954,559 | - | C1H1g02335 | C2H1g02068 | LOC_Os01g57930 | Os01g0789100 | - | Detail |
| CX1g004326 | 1:29,956,135-29,957,910 | + | C1H1g09857 | C2H1g28667 | LOC_Os01g57940 | Os01g0789200 | - | Detail |
| CX1g001669 | 1:29,959,482-29,961,382 | - | C1H1g08159 | C2H1g05555 | LOC_Os01g58070 | Os01g0793100 | - | Detail |
| CX1g002006 | 1:29,965,163-29,966,335 | + | C1H1g00365 | C2H1g29383 | LOC_Os01g58080 | Os01g0793200 | - | Detail |
| CX1g003912 | 1:29,971,746-29,976,366 | - | C1H1g11361 | C2H1g29186 | LOC_Os01g58100 | Os01g0793300 | - | Detail |
| CX1g006007 | 1:29,980,184-29,984,833 | - | C1H1g17382 | C2H1g23821 | LOC_Os01g58114 | Os01g0793500 | - | Detail |
| CX1g006998 | 1:29,991,252-29,991,590 | - | C1H1g05353 | C2H5g05803 | LOC_Os01g58130 | Os01g0793800 | - | Detail |
| CX1g001752 | 1:29,997,422-29,997,742 | - | C1H1g19709 | C2H5g05803 | LOC_Os01g58140 | Os01g0793900 | - | Detail |
| CX1g005671 | 1:30,001,662-30,002,006 | - | C1H1g02015 | C2H5g05803 | LOC_Os01g58150 | Os01g0794100 | - | Detail |
| CX1g000505 | 1:30,023,698-30,026,314 | + | C1H1g08455 | C2H1g16569 | LOC_Os01g58194 | Os01g0794400 | - | Detail |