| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g19834 | 2:25,897,490-25,898,188 | + | C1H2g17371 | CX2g019917 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| C2H2g12350 | 2:25,906,290-25,907,369 | - | C1H2g00614 | CX2g020719 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| C2H2g27051 | 2:25,916,250-25,919,973 | - | C1H2g03932 | CX2g020860 | LOC_Os02g45910 | Os02g0684150 | OsDNA2_15 | Detail |
| C2H2g04078 | 2:25,923,590-25,928,192 | + | C1H2g09273 | CX2g021780 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| C2H2g07890 | 2:25,928,444-25,929,087 | - | C1H2g23248 | CX2g023573 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| C2H2g23208 | 2:25,933,967-25,934,278 | - | C1H2g07518 | CX2g023547 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| C2H2g03417 | 2:25,934,838-25,937,935 | + | C1H2g17890 | CX2g023866 | LOC_Os02g45950 | Os02g0684600 | - | Detail |
| C2H2g24497 | 2:25,938,557-25,939,423 | + | C1H2g27881 | CX2g019320 | - | - | - | Detail |
| C2H2g17403 | 2:25,946,401-25,952,525 | + | C1H2g27343 | CX2g023375 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| C2H2g16948 | 2:25,953,171-25,953,797 | + | - | - | - | - | - | Detail |
| C2H2g07817 | 2:25,957,041-25,957,384 | + | C1H2g11465 | CX7g047983 | - | Os02g0117400 | - | Detail |
| C2H2g27686 | 2:25,963,024-25,965,649 | - | C1H2g24305 | CX2g019726 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| C2H2g27892 | 2:25,976,877-25,979,425 | - | C1H2g27920 | CX2g023473 | LOC_Os02g46080 | Os02g0685600 | - | Detail |
| C2H2g03411 | 2:25,981,902-25,987,049 | + | C1H2g28250 | CX2g020113 | LOC_Os02g46090 | Os02g0685900 | OsCPK5 | Detail |
| C2H2g19134 | 2:25,991,362-25,991,931 | - | C1H2g26668 | CX2g020098 | LOC_Os02g46100 | Os02g0686100 | OsATL32 | Detail |
| C2H2g06457 | 2:25,999,464-26,003,538 | - | C1H2g04547 | CX2g020840 | LOC_Os02g46120 | Os02g0686300 | - | Detail |
| C2H2g09278 | 2:26,003,711-26,008,957 | + | C1H2g29736 | CX2g022035 | LOC_Os02g46130 | Os02g0686400 | - | Detail |
| C2H2g01630 | 2:26,011,921-26,012,752 | + | C1H2g13130 | CX2g023233 | LOC_Os02g46140 | Os02g0686500 | - | Detail |
| C2H2g28721 | 2:26,013,006-26,017,407 | - | C1H2g25245 | CX2g022938 | LOC_Os02g46150 | Os02g0686600 | - | Detail |
| C2H2g18789 | 2:26,024,379-26,024,747 | - | C1H2g26309 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057949 | 9:7,032,527-7,038,532 | - | C1H9g12166 | C2H9g07648 | LOC_Os09g12730 | Os09g0298700 | OsRRM | Detail |
| CX9g055930 | 9:7,043,464-7,043,649 | + | - | - | - | - | - | Detail |
| CX9g057083 | 9:7,062,984-7,065,493 | + | C1H9g12987 | C2H9g10023 | LOC_Os09g12770 | Os09g0299200 | OsMYBc, MYBc | Detail |
| CX9g057071 | 9:7,069,939-7,070,816 | - | C1H5g05403 | C2H9g16293 | LOC_Os05g28490 | Os05g0353100 | - | Detail |
| CX9g055774 | 9:7,072,142-7,072,693 | - | C1H5g24420 | C2H5g11101 | LOC_Os05g48489 | - | - | Detail |
| CX9g058183 | 9:7,074,750-7,075,227 | + | C1H9g12401 | C2H9g22093 | LOC_Os09g12780 | Os09g0299300 | - | Detail |
| CX9g056426 | 9:7,079,061-7,082,980 | - | C1H9g11121 | C2H9g17440 | LOC_Os09g12790 | Os09g0299400 | - | Detail |
| CX9g056639 | 9:7,088,884-7,092,377 | - | C1H9g03619 | C2H9g04412 | LOC_Os09g12800 | Os09g0299500 | - | Detail |
| CX9g055574 | 9:7,101,289-7,102,291 | + | C1H9g06978 | C2H9g28630 | - | - | - | Detail |
| CX9g058016 | 9:7,106,296-7,106,778 | - | - | - | - | - | - | Detail |
| CX9g057878 | 9:7,117,409-7,119,378 | - | C1H9g12330 | C2H9g13623 | LOC_Os09g12840 | Os09g0304500 | - | Detail |
| CX9g054975 | 9:7,174,055-7,175,278 | + | C1H9g07532 | C2H9g11004 | LOC_Os09g12970 | Os09g0300800 | - | Detail |
| CX9g057101 | 9:7,192,849-7,193,349 | - | - | - | LOC_Os09g12990 | - | - | Detail |
| CX9g055982 | 9:7,259,730-7,266,238 | + | C1H9g07532 | C2H9g22626 | LOC_Os09g13040 | Os09g0301800 | - | Detail |
| CX9g055202 | 9:7,326,480-7,328,312 | + | C1H9g12330 | C2H9g13623 | LOC_Os09g12840 | Os09g0304500 | - | Detail |
| CX9g054984 | 9:7,333,010-7,333,300 | - | - | - | - | - | - | Detail |
| CX9g057613 | 9:7,336,957-7,339,676 | - | C1H9g12330 | C2H9g13623 | LOC_Os09g12840 | Os09g0305300 | - | Detail |
| CX9g057740 | 9:7,352,171-7,352,428 | + | - | - | - | - | - | Detail |
| CX9g055848 | 9:7,356,944-7,358,283 | - | - | - | - | - | - | Detail |
| CX9g058092 | 9:7,359,373-7,361,547 | - | - | - | LOC_Os08g08130 | Os09g0241700 | - | Detail |