| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02733 | 1:884,535-889,937 | + | C1H1g26055 | - | LOC_Os01g02890 | Os01g0118300 | SUI1, OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1 | Detail |
| C2H1g25728 | 1:894,155-897,038 | - | C1H1g13587 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g24887 | 1:905,925-909,298 | - | C1H1g19340 | - | LOC_Os01g02910 | Os01g0118600 | - | Detail |
| C2H1g16133 | 1:911,678-914,437 | - | C1H1g28376 | - | LOC_Os01g02920 | Os01g0118700 | - | Detail |
| C2H1g28060 | 1:918,001-920,692 | - | C1H1g06299 | - | LOC_Os01g02930 | Os01g0119000 | - | Detail |
| C2H1g09306 | 1:929,892-933,650 | - | C1H1g29708 | - | LOC_Os01g02940 | Os01g0119100 | - | Detail |
| C2H1g08550 | 1:940,072-940,593 | + | C1H1g13986 | - | - | - | - | Detail |
| C2H1g16398 | 1:943,043-943,377 | - | - | - | - | - | - | Detail |
| C2H1g12790 | 1:949,262-951,056 | - | C1H1g01366 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g11248 | 1:951,971-959,371 | - | C1H1g03260 | CX1g005069 | LOC_Os01g03020 | Os01g0120300 | - | Detail |
| C2H1g00360 | 1:959,862-962,390 | - | C1H1g11508 | CX1g001161 | LOC_Os01g03030 | Os01g0120400 | - | Detail |
| C2H1g23693 | 1:963,663-965,148 | - | C1H1g03575 | CX1g002228 | LOC_Os01g03040 | Os01g0120500 | - | Detail |
| C2H1g04453 | 1:966,291-968,290 | + | C1H1g25620 | CX1g000645 | LOC_Os01g03050 | Os01g0120600 | - | Detail |
| C2H1g02238 | 1:969,438-970,298 | - | - | CX1g004156 | LOC_Os01g03060 | Os01g0120700 | OsHRC | Detail |
| C2H1g07428 | 1:972,581-979,601 | - | C1H1g21397 | CX1g002673 | LOC_Os01g03070 | Os01g0120800 | - | Detail |
| C2H1g00585 | 1:982,117-982,722 | + | - | CX1g000024 | LOC_Os01g03080 | Os01g0121000 | - | Detail |
| C2H1g24271 | 1:984,465-987,582 | + | C1H1g11884 | CX1g003419 | LOC_Os01g03090 | Os01g0121100 | - | Detail |
| C2H1g00075 | 1:988,256-990,528 | - | C1H1g21163 | CX1g006351 | LOC_Os01g03100 | Os01g0121200 | - | Detail |
| C2H1g03352 | 1:998,181-1,003,121 | - | C1H1g02205 | CX1g000986 | LOC_Os01g03110 | Os01g0121300 | - | Detail |
| C2H1g22579 | 1:1,018,666-1,019,160 | - | C1H1g30654 | CX1g006139 | LOC_Os01g03130 | Os01g0121500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057271 | 9:6,857,877-6,858,189 | - | - | - | - | - | - | Detail |
| CX9g056635 | 9:6,858,881-6,872,811 | + | C1H9g15369 | C2H9g29911 | LOC_Os09g12350 | - | - | Detail |
| CX9g057157 | 9:6,876,187-6,877,644 | - | - | C2H9g24980 | LOC_Os09g12380 | Os09g0295000 | - | Detail |
| CX9g055369 | 9:6,924,269-6,928,306 | + | C1H9g09868 | C2H9g17607 | LOC_Os09g12500 | Os09g0296400 | - | Detail |
| CX9g055393 | 9:6,930,170-6,930,760 | + | C1H9g28667 | C2H9g14588 | LOC_Os09g12510 | Os09g0296500 | - | Detail |
| CX9g057641 | 9:6,933,259-6,933,660 | + | C1H9g22275 | C2H9g07479 | - | - | - | Detail |
| CX9g057610 | 9:6,935,392-6,937,604 | + | C1H9g04248 | C2H9g28255 | LOC_Os09g12530 | Os09g0296700 | - | Detail |
| CX9g056490 | 9:6,941,238-6,943,957 | + | C1H9g21187 | C2H9g16228 | LOC_Os09g12540 | Os09g0296800 | OsLhcb7 | Detail |
| CX9g056084 | 9:6,946,578-6,950,907 | + | C1H9g06139 | C2H9g17110 | LOC_Os09g12550 | Os09g0296900 | HSLG2 | Detail |
| CX9g058097 | 9:6,953,461-6,960,071 | + | C1H9g10693 | C2H9g04106 | LOC_Os09g12560 | Os09g0297000 | FC1 | Detail |
| CX9g054933 | 9:6,960,954-6,964,035 | - | C1H9g27717 | C2H9g24691 | LOC_Os09g12570 | Os09g0297100 | - | Detail |
| CX9g054925 | 9:6,967,318-6,968,889 | + | - | C2H9g06399 | LOC_Os09g12590 | Os09g0297300 | OsSTP24 | Detail |
| CX9g058188 | 9:6,972,530-6,975,568 | - | C1H9g22827 | C2H9g07019 | LOC_Os09g12600 | Os09g0297400 | PPT1, OsPPT1 | Detail |
| CX9g057576 | 9:6,982,524-6,983,623 | + | - | C2H9g08238 | - | - | - | Detail |
| CX9g054945 | 9:6,983,766-6,984,355 | - | C1H9g17081 | C2H9g10281 | LOC_Os09g12620 | Os09g0297800 | - | Detail |
| CX9g057472 | 9:6,985,265-6,985,957 | - | C1H9g28667 | C2H9g19494 | LOC_Os09g12630 | Os09g0297900 | - | Detail |
| CX9g056555 | 9:6,989,287-6,993,905 | + | C1H9g31684 | C2H9g30271 | LOC_Os09g12650 | Os09g0298100 | OsPFP1α4 | Detail |
| CX9g057527 | 9:6,995,252-6,999,042 | - | C1H9g00979 | C2H9g02028 | LOC_Os09g12660 | Os09g0298200 | - | Detail |
| CX9g056017 | 9:7,005,314-7,010,417 | + | C1H9g04278 | C2H9g04760 | LOC_Os09g12710 | Os09g0298400 | - | Detail |
| CX9g056522 | 9:7,012,265-7,016,810 | - | C1H9g29739 | C2H9g25888 | LOC_Os09g12720 | Os09g0298500 | - | Detail |