| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g19767 | 8:15,121,275-15,124,496 | - | C1H8g30278 | CX8g051831 | LOC_Os08g28710 | Os08g0374701 | - | Detail |
| C2H8g22977 | 8:15,137,161-15,143,449 | - | C1H8g03479 | CX8g050795 | LOC_Os08g28730 | Os08g0374800 | Osfc24, OsUGE2, FC24/OsUGE2 | Detail |
| C2H8g13630 | 8:15,148,212-15,150,239 | - | C1H8g29557 | - | LOC_Os08g28740 | Os08g0374900 | - | Detail |
| C2H8g05259 | 8:15,150,858-15,151,166 | + | C1H8g03522 | - | - | - | - | Detail |
| C2H8g22793 | 8:15,151,403-15,151,849 | + | C1H8g21037 | CX8g051236 | - | - | - | Detail |
| C2H8g25045 | 8:15,163,933-15,165,787 | + | C1H8g29076 | CX8g051811 | LOC_Os08g29020 | Os08g0501500 | - | Detail |
| C2H8g13021 | 8:15,169,575-15,169,992 | + | - | - | - | - | - | Detail |
| C2H8g14500 | 8:15,199,178-15,203,504 | + | C1H8g18242 | CX8g054118 | LOC_Os08g28760 | Os08g0375700 | - | Detail |
| C2H8g04590 | 8:15,247,686-15,251,366 | + | C1H8g05287 | CX8g052570 | LOC_Os08g28840 | Os08g0375900 | - | Detail |
| C2H8g13625 | 8:15,256,922-15,259,854 | + | C1H8g14753 | CX8g050967 | LOC_Os08g28860 | Os08g0376200 | - | Detail |
| C2H8g14131 | 8:15,263,635-15,266,955 | - | C1H8g21009 | CX8g050470 | LOC_Os08g28870 | Os08g0376300 | - | Detail |
| C2H8g19942 | 8:15,273,609-15,276,904 | + | C1H8g02054 | CX8g054764 | LOC_Os08g28880 | Os08g0376550 | - | Detail |
| C2H8g17464 | 8:15,287,058-15,293,670 | + | C1H8g13677 | CX8g050879 | LOC_Os08g28890 | Os08g0376600 | - | Detail |
| C2H8g19076 | 8:15,298,457-15,298,695 | + | C1H8g10652 | - | - | - | - | Detail |
| C2H8g16728 | 8:15,312,119-15,316,563 | + | C1H8g03144 | CX8g053091 | LOC_Os08g28940 | Os08g0377100 | - | Detail |
| C2H8g04374 | 8:15,327,050-15,327,845 | + | C1H8g29066 | CX8g053242 | LOC_Os08g28950 | Os08g0377200 | RR12, OsRR12, Rra11, OsRR8, OsRRA11 | Detail |
| C2H8g25366 | 8:15,348,126-15,349,326 | + | C1H8g14468 | CX8g050766 | LOC_Os08g28970 | Os08g0377500 | - | Detail |
| C2H8g07044 | 8:15,349,645-15,352,586 | - | C1H8g30557 | CX8g054003 | LOC_Os08g28980 | Os08g0377400 | - | Detail |
| C2H8g29695 | 8:15,359,864-15,361,745 | - | C1H8g10166 | CX8g053995 | LOC_Os08g29110 | Os08g0378900 | OsTRXz | Detail |
| C2H8g10295 | 8:15,362,865-15,378,768 | - | C1H8g31869 | CX8g051710 | LOC_Os08g29124 | Os08g0379000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055278 | 9:6,111,839-6,115,015 | - | - | C2H9g18844 | LOC_Os09g11220 | - | - | Detail |
| CX9g055683 | 9:6,120,581-6,120,817 | - | - | C2H9g29385 | - | - | - | Detail |
| CX9g058079 | 9:6,122,833-6,127,434 | + | C1H9g00489 | C2H9g02512 | LOC_Os09g11230 | Os09g0284200 | - | Detail |
| CX9g056754 | 9:6,129,472-6,132,037 | + | C1H9g17976 | C2H9g29412 | LOC_Os09g11240 | Os09g0284300 | - | Detail |
| CX9g055562 | 9:6,137,608-6,139,812 | - | C1H9g18575 | C2H9g18317 | LOC_Os09g11250 | Os09g0284400 | - | Detail |
| CX9g055837 | 9:6,142,860-6,150,805 | - | C1H9g18907 | C2H9g18253 | LOC_Os09g11270 | Os09g0284600 | - | Detail |
| CX9g054971 | 9:6,168,085-6,170,802 | - | C1H9g19420 | C2H9g20861 | LOC_Os09g11440 | Os09g0286300 | - | Detail |
| CX9g057306 | 9:6,172,784-6,181,472 | - | C1H9g09221 | C2H9g08679 | LOC_Os09g11450 | Os09g0286400 | OsNHX5, GPA6 | Detail |
| CX9g057489 | 9:6,183,876-6,186,217 | + | - | - | - | - | - | Detail |
| CX9g057392 | 9:6,188,245-6,188,925 | - | C1H9g07448 | C2H9g10409 | LOC_Os09g11460 | Os09g0286600 | - | Detail |
| CX9g055054 | 9:6,216,639-6,217,839 | - | C1H9g15004 | C2H9g16518 | LOC_Os09g11480 | Os09g0287000 | - | Detail |
| CX9g055952 | 9:6,242,595-6,242,834 | + | - | - | - | - | - | Detail |
| CX9g056785 | 9:6,249,342-6,249,527 | - | - | - | - | - | - | Detail |
| CX9g057241 | 9:6,251,542-6,252,357 | - | C1H9g21283 | C2H9g27982 | LOC_Os09g11480 | Os09g0287000 | - | Detail |
| CX9g055767 | 9:6,251,546-6,252,357 | + | - | - | - | - | - | Detail |
| CX9g056284 | 9:6,283,499-6,287,024 | - | C1H9g23365 | C2H9g23717 | LOC_Os09g11510 | Os09g0287300 | - | Detail |
| CX9g057407 | 9:6,288,152-6,289,999 | - | C1H9g29832 | C2H9g22223 | LOC_Os09g11520 | Os09g0287500 | - | Detail |
| CX9g056405 | 9:6,291,207-6,291,362 | + | - | - | - | - | - | Detail |
| CX9g055398 | 9:6,309,962-6,310,147 | + | - | - | - | - | - | Detail |
| CX9g056626 | 9:6,332,001-6,332,162 | - | - | - | - | Os01g0612350 | - | Detail |