| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g14118 | 1:32,395,517-32,401,373 | + | C1H1g24327 | CX1g006965 | LOC_Os01g63220 | Os01g0851000 | WLP2, OsFLN1 | Detail |
| C2H1g23902 | 1:32,398,168-32,402,851 | - | C1H1g16353 | CX1g000066 | LOC_Os01g63230 | Os01g0851100 | - | Detail |
| C2H1g01345 | 1:32,406,775-32,409,102 | - | C1H1g19302 | CX1g003216 | LOC_Os01g63240 | Os01g0851300 | - | Detail |
| C2H1g07756 | 1:32,420,236-32,424,345 | - | C1H1g13651 | CX1g000616 | LOC_Os01g63250 | Os01g0851400 | - | Detail |
| C2H1g20633 | 1:32,434,269-32,440,537 | - | C1H1g15673 | CX1g001220 | LOC_Os01g63270 | Os01g0851700 | - | Detail |
| C2H1g02734 | 1:32,446,598-32,449,665 | - | C1H1g03471 | CX1g001145 | LOC_Os01g63280 | Os01g0852100 | - | Detail |
| C2H1g20941 | 1:32,450,205-32,454,017 | - | C1H1g05192 | CX1g001502 | LOC_Os01g63290 | Os01g0852200 | OsPHT4;3 | Detail |
| C2H1g02794 | 1:32,471,192-32,473,761 | - | C1H1g31702 | CX1g006459 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| C2H1g02458 | 1:32,475,228-32,475,873 | - | C1H1g31702 | CX1g006459 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| C2H1g22636 | 1:32,481,628-32,483,736 | + | C1H1g31372 | CX1g005825 | LOC_Os01g63400 | Os01g0852900 | - | Detail |
| C2H1g00294 | 1:32,484,972-32,486,025 | - | C1H1g22680 | CX1g001333 | LOC_Os01g63410 | Os01g0853000 | - | Detail |
| C2H1g03435 | 1:32,498,447-32,502,232 | + | C1H1g21861 | CX1g004784 | LOC_Os01g63420 | Os01g0853400 | OsCOI1a, OsCOI1, Os_F0728 | Detail |
| C2H1g21411 | 1:32,510,019-32,510,465 | + | C1H1g01084 | CX1g005287 | - | - | - | Detail |
| C2H1g02642 | 1:32,512,794-32,514,472 | - | C1H1g22221 | CX1g001449 | LOC_Os01g63460 | Os01g0853700 | - | Detail |
| C2H1g15087 | 1:32,557,274-32,557,974 | - | C1H1g30766 | CX1g000677 | LOC_Os01g63510 | Os01g0854500 | QHB | Detail |
| C2H1g11964 | 1:32,568,881-32,574,221 | - | C1H1g06653 | CX1g000343 | LOC_Os01g63580 | Os01g0855000 | - | Detail |
| C2H1g08929 | 1:32,583,855-32,589,389 | - | - | - | - | - | - | Detail |
| C2H1g27825 | 1:32,594,203-32,596,288 | + | C1H1g12873 | CX1g005974 | LOC_Os01g63620 | Os01g0855200 | - | Detail |
| C2H1g08166 | 1:32,609,134-32,611,262 | + | C1H1g14003 | CX1g003617 | LOC_Os01g63680 | Os01g0855400 | Os2R_MYB17 | Detail |
| C2H1g04964 | 1:32,624,570-32,628,271 | + | C1H1g14553 | CX1g004920 | LOC_Os01g63710 | Os01g0856000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056448 | 9:3,580,676-3,583,656 | - | C1H9g26283 | C2H9g28356 | LOC_Os09g07160 | Os09g0246700 | - | Detail |
| CX9g057493 | 9:3,593,365-3,598,797 | - | C1H9g05149 | C2H9g26775 | LOC_Os09g07290 | Os09g0247600 | - | Detail |
| CX9g056792 | 9:3,600,016-3,621,251 | - | C1H9g03723 | C2H9g13808 | LOC_Os09g07294 | Os09g0247700 | BIG, OsBIG | Detail |
| CX9g057562 | 9:3,638,210-3,644,959 | + | C1H9g01018 | C2H9g09397 | LOC_Os09g07320 | Os09g0248000 | - | Detail |
| CX9g055193 | 9:3,668,297-3,671,542 | + | C1H9g24946 | C2H9g28802 | LOC_Os09g07350 | Os09g0248100 | - | Detail |
| CX9g057457 | 9:3,674,093-3,686,989 | - | C1H9g15667 | C2H9g10868 | LOC_Os09g07360 | Os09g0248300 | - | Detail |
| CX9g057597 | 9:3,706,449-3,708,684 | - | C1H9g27878 | C2H9g06448 | LOC_Os09g07460 | Os09g0249000 | - | Detail |
| CX9g057902 | 9:3,718,448-3,720,032 | + | C1H9g24582 | C2H9g20745 | LOC_Os09g07480 | Os09g0249400 | - | Detail |
| CX9g056442 | 9:3,722,074-3,723,144 | + | C1H9g24582 | C2H9g20745 | LOC_Os09g07480 | Os09g0249400 | - | Detail |
| CX9g058158 | 9:3,725,217-3,728,677 | - | C1H9g20835 | C2H9g06831 | LOC_Os09g07500 | Os09g0249600 | - | Detail |
| CX9g054955 | 9:3,732,552-3,737,385 | - | C1H9g20701 | C2H9g07458 | LOC_Os09g07510 | Os09g0249700 | - | Detail |
| CX9g057433 | 9:3,746,652-3,750,009 | + | C1H9g00474 | C2H9g12303 | LOC_Os09g07570 | Os09g0249900 | - | Detail |
| CX9g058038 | 9:3,750,967-3,759,888 | - | C1H9g08915 | C2H9g13423 | LOC_Os09g07580 | Os09g0270700 | - | Detail |
| CX9g057408 | 9:3,762,538-3,763,847 | + | - | - | - | - | - | Detail |
| CX9g058163 | 9:3,765,231-3,765,443 | - | - | - | LOC_Os06g24890 | Os06g0355701 | - | Detail |
| CX9g058052 | 9:3,855,579-3,856,273 | - | - | - | - | Os09g0250150 | - | Detail |
| CX9g055768 | 9:3,865,024-3,874,425 | + | C1H9g03513 | C2H9g19501 | LOC_Os03g06900 | Os03g0165000 | TOP3α | Detail |
| CX9g056103 | 9:3,878,424-3,878,714 | + | - | - | LOC_Os09g07620 | Os09g0250200 | - | Detail |
| CX9g056444 | 9:3,880,270-3,880,473 | + | - | - | - | Os02g0188201 | - | Detail |
| CX9g056142 | 9:3,886,736-3,893,320 | + | C1H9g17448 | C2H9g12401 | LOC_Os09g07660 | Os09g0250700 | - | Detail |