| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19126 | 4:28,482,932-28,483,633 | - | C1H4g06177 | CX4g036135 | LOC_Os04g55520 | Os04g0648900 | - | Detail |
| C2H4g07264 | 4:28,514,758-28,515,506 | + | C1H4g09680 | - | LOC_Os04g55560 | - | - | Detail |
| C2H4g14278 | 4:28,515,961-28,517,749 | + | C1H4g09680 | CX4g031647 | LOC_Os04g55560 | Os04g0649100 | SHAT1, AP2/EREBP#043, AP2/EREBP43 | Detail |
| C2H4g17474 | 4:28,522,715-28,529,752 | + | C1H4g00144 | CX4g035239 | LOC_Os04g55570 | Os04g0649200 | - | Detail |
| C2H4g02532 | 4:28,539,464-28,540,345 | - | C1H4g30735 | CX4g032527 | LOC_Os04g55590 | Os04g0649400 | WOX4, OsWOX4, Os WOX4 | Detail |
| C2H4g16594 | 4:28,545,758-28,546,096 | - | - | CX4g035485 | LOC_Os04g55600 | Os04g0649500 | - | Detail |
| C2H4g01325 | 4:28,552,020-28,552,618 | + | C1H4g22307 | - | - | - | - | Detail |
| C2H4g05985 | 4:28,552,135-28,552,428 | - | - | CX4g035117 | LOC_Os04g55610 | Os04g0649600 | - | Detail |
| C2H4g00524 | 4:28,554,014-28,557,592 | - | C1H4g26510 | CX4g031472 | LOC_Os04g55620 | Os04g0649700 | - | Detail |
| C2H4g24247 | 4:28,561,500-28,562,462 | + | C1H4g26377 | CX4g033189 | LOC_Os04g55640 | Os04g0649900 | - | Detail |
| C2H4g16213 | 4:28,567,208-28,567,720 | - | - | - | - | - | - | Detail |
| C2H4g10875 | 4:28,567,783-28,568,747 | + | C1H4g19253 | CX4g032778 | LOC_Os04g43030 | Os04g0509100 | - | Detail |
| C2H4g01573 | 4:28,569,522-28,573,198 | - | C1H4g30646 | CX4g032034 | LOC_Os04g55650 | Os04g0650000 | - | Detail |
| C2H4g09445 | 4:28,578,934-28,580,745 | - | C1H4g23223 | CX4g034578 | LOC_Os04g55660 | Os04g0650200 | - | Detail |
| C2H4g25070 | 4:28,582,467-28,585,780 | - | C1H4g17876 | CX4g035022 | LOC_Os04g55670 | Os04g0650300 | OsGT43I | Detail |
| C2H4g15264 | 4:28,590,936-28,592,348 | - | C1H4g16494 | CX4g036592 | LOC_Os04g55680 | Os04g0506000 | - | Detail |
| C2H4g30089 | 4:28,593,163-28,595,330 | + | C1H4g20767 | CX4g032417 | LOC_Os04g55690 | Os04g0650500 | - | Detail |
| C2H4g16279 | 4:28,595,912-28,598,901 | - | C1H4g29586 | CX4g034904 | LOC_Os04g55700 | Os04g0650600 | - | Detail |
| C2H4g25286 | 4:28,607,792-28,610,745 | + | C1H4g11243 | CX4g032420 | LOC_Os04g55710 | Os04g0650700 | - | Detail |
| C2H4g06390 | 4:28,613,676-28,616,566 | + | C1H4g03632 | CX4g033907 | LOC_Os04g55720 | Os04g0650800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005392 | 1:29,592,525-29,593,364 | - | C1H1g31795 | C2H5g11517 | LOC_Os01g57150 | Os01g0779800 | - | Detail |
| CX1g001431 | 1:29,612,515-29,622,049 | + | C1H1g30935 | C2H1g09740 | LOC_Os01g57210 | Os01g0780400 | OsKTN80c | Detail |
| CX1g005945 | 1:29,623,397-29,628,184 | + | C1H1g29735 | C2H1g25105 | LOC_Os01g57220 | Os01g0780500 | - | Detail |
| CX1g001177 | 1:29,628,752-29,630,872 | - | C1H1g29464 | C2H1g26746 | LOC_Os01g57230 | Os01g0780600 | - | Detail |
| CX1g001653 | 1:29,636,751-29,640,724 | - | C1H1g11530 | C2H1g27245 | LOC_Os01g57240 | Os01g0780800 | - | Detail |
| CX1g000440 | 1:29,650,295-29,650,936 | + | C1H1g25997 | - | LOC_Os01g57260 | Os01g0781000 | - | Detail |
| CX1g007095 | 1:29,653,407-29,655,804 | + | C1H1g03530 | C2H1g10979 | LOC_Os01g57270 | Os01g0781100 | - | Detail |
| CX1g006355 | 1:29,665,071-29,670,391 | + | C1H1g23430 | C2H1g08583 | LOC_Os01g57280 | Os01g0781200 | Pi64 | Detail |
| CX1g001870 | 1:29,671,592-29,675,922 | - | C1H1g05330 | C2H1g19777 | LOC_Os01g57350 | Os01g0782200 | - | Detail |
| CX1g002627 | 1:29,677,619-29,679,782 | - | C1H1g16270 | C2H1g15609 | LOC_Os01g57360 | Os01g0782500 | - | Detail |
| CX1g006567 | 1:29,688,727-29,692,777 | - | C1H1g26913 | C2H1g26173 | LOC_Os01g57370 | Os01g0782800 | OsCNGC15 | Detail |
| CX1g004406 | 1:29,700,186-29,700,571 | - | C1H1g18891 | C2H1g20034 | LOC_Os01g57400 | Os01g0783000 | OsLysMe2 | Detail |
| CX1g002479 | 1:29,701,447-29,703,598 | + | C1H1g11272 | C2H1g22636 | LOC_Os01g57410 | Os01g0783100 | - | Detail |
| CX1g003400 | 1:29,705,765-29,711,911 | - | C1H1g14162 | C2H1g00339 | LOC_Os01g57420 | Os01g0783200 | - | Detail |
| CX1g003974 | 1:29,714,282-29,716,885 | - | C1H1g12309 | C2H1g03808 | LOC_Os01g57440 | Os01g0783400 | - | Detail |
| CX1g005821 | 1:29,719,723-29,720,538 | + | - | - | - | Os05g0501650 | - | Detail |
| CX1g004706 | 1:29,724,243-29,726,063 | + | C1H1g15791 | C2H1g00954 | LOC_Os01g57460 | Os01g0783600 | - | Detail |
| CX1g001288 | 1:29,726,455-29,726,736 | - | C1H1g18932 | - | LOC_Os01g57470 | Os01g0783700 | - | Detail |
| CX1g004924 | 1:29,730,540-29,742,080 | + | C1H1g11033 | C2H1g29910 | LOC_Os01g57490 | Os01g0783900 | SDRLP-11 | Detail |
| CX1g000763 | 1:29,744,485-29,748,555 | + | C1H1g03347 | C2H1g11023 | LOC_Os01g57510 | Os01g0784200 | SDRLK-15 | Detail |