| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06427 | 5:2,991,615-2,997,443 | + | C2H5g19140 | CX5g037159 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| C1H5g15255 | 5:3,003,341-3,016,934 | + | C2H5g13429 | CX5g040180 | LOC_Os05g06690 | Os05g0159000 | - | Detail |
| C1H5g29215 | 5:3,020,866-3,023,528 | + | C2H5g10674 | CX5g036830 | LOC_Os05g06700 | Os05g0159100 | - | Detail |
| C1H5g24999 | 5:3,024,303-3,028,380 | - | C2H5g18018 | CX5g040661 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| C1H5g19191 | 5:3,030,462-3,037,921 | - | C2H5g19257 | CX5g037735 | LOC_Os05g06720 | Os05g0159300 | DARX1, GELP62 | Detail |
| C1H5g26427 | 5:3,057,170-3,060,791 | + | C2H5g24095 | CX5g036773 | LOC_Os05g06750 | Os05g0160000 | - | Detail |
| C1H5g22506 | 5:3,062,176-3,065,516 | + | C2H5g30095 | CX5g040221 | LOC_Os05g06760 | Os05g0160100 | - | Detail |
| C1H5g10936 | 5:3,070,796-3,071,813 | - | C2H5g06168 | CX5g038772 | LOC_Os05g06780 | Os05g0160300 | - | Detail |
| C1H5g01032 | 5:3,079,237-3,086,416 | + | C2H5g24726 | CX5g039426 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| C1H5g16939 | 5:3,114,826-3,119,380 | - | C2H5g04837 | CX5g039426 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| C1H5g08386 | 5:3,121,261-3,124,469 | - | C2H5g14563 | CX5g038917 | LOC_Os05g06814 | Os05g0161400 | - | Detail |
| C1H5g11456 | 5:3,134,137-3,138,736 | + | C2H5g12914 | CX5g036690 | LOC_Os05g06840 | Os05g0160800 | - | Detail |
| C1H5g17757 | 5:3,148,121-3,151,561 | + | C2H5g20736 | - | LOC_Os05g06890 | Os05g0161200 | OsCRSH1 | Detail |
| C1H5g28932 | 5:3,156,121-3,159,136 | + | C2H5g07576 | CX5g039426 | LOC_Os05g06910 | Os05g0161400 | - | Detail |
| C1H5g14109 | 5:3,169,114-3,169,720 | + | - | - | - | - | - | Detail |
| C1H5g24444 | 5:3,170,545-3,173,020 | + | C2H5g24440 | - | LOC_Os05g06920 | Os05g0161500 | OsCRSH2 | Detail |
| C1H5g10245 | 5:3,182,963-3,185,281 | + | C2H5g21538 | - | LOC_Os05g06940 | Os05g0161800 | OsCRSH3 | Detail |
| C1H5g04552 | 5:3,194,365-3,196,462 | - | C2H5g10505 | CX5g038822 | LOC_Os05g06970 | Os05g0162000 | - | Detail |
| C1H5g19592 | 5:3,201,093-3,211,946 | - | C2H5g18624 | CX5g040374 | LOC_Os05g06980 | Os05g0162200 | - | Detail |
| C1H5g00882 | 5:3,225,916-3,228,865 | - | C2H5g07564 | CX5g040436 | LOC_Os05g07000 | Os05g0162600 | OsRS2Z39 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005392 | 1:29,592,525-29,593,364 | - | C1H1g31795 | C2H5g11517 | LOC_Os01g57150 | Os01g0779800 | - | Detail |
| CX1g001431 | 1:29,612,515-29,622,049 | + | C1H1g30935 | C2H1g09740 | LOC_Os01g57210 | Os01g0780400 | OsKTN80c | Detail |
| CX1g005945 | 1:29,623,397-29,628,184 | + | C1H1g29735 | C2H1g25105 | LOC_Os01g57220 | Os01g0780500 | - | Detail |
| CX1g001177 | 1:29,628,752-29,630,872 | - | C1H1g29464 | C2H1g26746 | LOC_Os01g57230 | Os01g0780600 | - | Detail |
| CX1g001653 | 1:29,636,751-29,640,724 | - | C1H1g11530 | C2H1g27245 | LOC_Os01g57240 | Os01g0780800 | - | Detail |
| CX1g000440 | 1:29,650,295-29,650,936 | + | C1H1g25997 | - | LOC_Os01g57260 | Os01g0781000 | - | Detail |
| CX1g007095 | 1:29,653,407-29,655,804 | + | C1H1g03530 | C2H1g10979 | LOC_Os01g57270 | Os01g0781100 | - | Detail |
| CX1g006355 | 1:29,665,071-29,670,391 | + | C1H1g23430 | C2H1g08583 | LOC_Os01g57280 | Os01g0781200 | Pi64 | Detail |
| CX1g001870 | 1:29,671,592-29,675,922 | - | C1H1g05330 | C2H1g19777 | LOC_Os01g57350 | Os01g0782200 | - | Detail |
| CX1g002627 | 1:29,677,619-29,679,782 | - | C1H1g16270 | C2H1g15609 | LOC_Os01g57360 | Os01g0782500 | - | Detail |
| CX1g006567 | 1:29,688,727-29,692,777 | - | C1H1g26913 | C2H1g26173 | LOC_Os01g57370 | Os01g0782800 | OsCNGC15 | Detail |
| CX1g004406 | 1:29,700,186-29,700,571 | - | C1H1g18891 | C2H1g20034 | LOC_Os01g57400 | Os01g0783000 | OsLysMe2 | Detail |
| CX1g002479 | 1:29,701,447-29,703,598 | + | C1H1g11272 | C2H1g22636 | LOC_Os01g57410 | Os01g0783100 | - | Detail |
| CX1g003400 | 1:29,705,765-29,711,911 | - | C1H1g14162 | C2H1g00339 | LOC_Os01g57420 | Os01g0783200 | - | Detail |
| CX1g003974 | 1:29,714,282-29,716,885 | - | C1H1g12309 | C2H1g03808 | LOC_Os01g57440 | Os01g0783400 | - | Detail |
| CX1g005821 | 1:29,719,723-29,720,538 | + | - | - | - | Os05g0501650 | - | Detail |
| CX1g004706 | 1:29,724,243-29,726,063 | + | C1H1g15791 | C2H1g00954 | LOC_Os01g57460 | Os01g0783600 | - | Detail |
| CX1g001288 | 1:29,726,455-29,726,736 | - | C1H1g18932 | - | LOC_Os01g57470 | Os01g0783700 | - | Detail |
| CX1g004924 | 1:29,730,540-29,742,080 | + | C1H1g11033 | C2H1g29910 | LOC_Os01g57490 | Os01g0783900 | SDRLP-11 | Detail |
| CX1g000763 | 1:29,744,485-29,748,555 | + | C1H1g03347 | C2H1g11023 | LOC_Os01g57510 | Os01g0784200 | SDRLK-15 | Detail |