| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g13057 | 9:12,584,138-12,585,307 | - | C2H9g20999 | CX9g057047 | LOC_Os09g25430 | Os09g0421700 | DRG9 | Detail |
| C1H9g23603 | 9:12,587,943-12,590,276 | - | C2H9g15585 | CX9g057707 | LOC_Os09g25440 | Os09g0421800 | - | Detail |
| C1H9g04652 | 9:12,593,636-12,598,556 | - | C2H9g18547 | CX9g057935 | LOC_Os09g25460 | Os09g0422000 | - | Detail |
| C1H9g01940 | 9:12,615,438-12,619,954 | + | C2H9g29866 | CX9g055442 | LOC_Os09g25490 | Os09g0422500 | BC6, Bc6*, Bc6, OsCesA9, CESA9, OsCESA9, OS_CESA09, OsCesA 9, CesA9 | Detail |
| C1H9g20433 | 9:12,620,407-12,626,122 | - | C2H9g13149 | CX9g056791 | LOC_Os09g25500 | Os09g0422600 | - | Detail |
| C1H9g21248 | 9:12,635,681-12,639,402 | + | C2H9g06178 | CX9g057973 | LOC_Os09g25540 | Os09g0423200 | - | Detail |
| C1H9g20875 | 9:12,649,113-12,652,671 | + | C2H9g01199 | CX9g056726 | LOC_Os09g25550 | Os09g0423300 | - | Detail |
| C1H9g17046 | 9:12,653,522-12,654,362 | + | C2H9g29489 | - | LOC_Os09g25560 | Os09g0423400 | - | Detail |
| C1H9g17486 | 9:12,661,767-12,665,414 | + | C2H9g29489 | CX9g056113 | LOC_Os09g25560 | Os09g0423400 | - | Detail |
| C1H9g03392 | 9:12,670,046-12,672,492 | + | C2H9g01038 | CX9g057440 | LOC_Os09g25570 | Os09g0423500 | - | Detail |
| C1H9g16029 | 9:12,674,210-12,680,470 | - | C2H9g24507 | CX9g057486 | LOC_Os09g25580 | Os09g0423600 | - | Detail |
| C1H9g26575 | 9:12,683,243-12,685,087 | + | C2H9g10831 | CX9g055033 | LOC_Os09g25590 | Os09g0423700 | - | Detail |
| C1H9g05792 | 9:12,689,878-12,692,291 | + | C2H9g19598 | CX9g056085 | - | Os09g0423800 | - | Detail |
| C1H9g02235 | 9:12,693,511-12,694,089 | + | C2H9g25061 | CX9g056085 | - | Os09g0423800 | - | Detail |
| C1H9g00425 | 9:12,707,019-12,709,306 | + | C2H9g10731 | CX9g057342 | LOC_Os09g25610 | Os09g0424200 | - | Detail |
| C1H9g11995 | 9:12,710,832-12,714,328 | - | C2H9g23538 | CX9g056823 | LOC_Os09g25625 | Os09g0424300 | - | Detail |
| C1H9g23061 | 9:12,721,715-12,722,705 | + | C2H9g21679 | CX9g057732 | - | - | - | Detail |
| C1H9g16841 | 9:12,724,903-12,725,151 | + | C2H9g08773 | - | - | Os09g0424501 | - | Detail |
| C1H9g06900 | 9:12,725,160-12,730,885 | + | C2H9g17706 | CX9g055223 | LOC_Os09g25640 | Os09g0424600 | - | Detail |
| C1H9g23183 | 9:12,731,686-12,739,342 | - | C2H9g22032 | CX9g054887 | LOC_Os09g25650 | Os09g0424701 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005392 | 1:29,592,525-29,593,364 | - | C1H1g31795 | C2H5g11517 | LOC_Os01g57150 | Os01g0779800 | - | Detail |
| CX1g001431 | 1:29,612,515-29,622,049 | + | C1H1g30935 | C2H1g09740 | LOC_Os01g57210 | Os01g0780400 | OsKTN80c | Detail |
| CX1g005945 | 1:29,623,397-29,628,184 | + | C1H1g29735 | C2H1g25105 | LOC_Os01g57220 | Os01g0780500 | - | Detail |
| CX1g001177 | 1:29,628,752-29,630,872 | - | C1H1g29464 | C2H1g26746 | LOC_Os01g57230 | Os01g0780600 | - | Detail |
| CX1g001653 | 1:29,636,751-29,640,724 | - | C1H1g11530 | C2H1g27245 | LOC_Os01g57240 | Os01g0780800 | - | Detail |
| CX1g000440 | 1:29,650,295-29,650,936 | + | C1H1g25997 | - | LOC_Os01g57260 | Os01g0781000 | - | Detail |
| CX1g007095 | 1:29,653,407-29,655,804 | + | C1H1g03530 | C2H1g10979 | LOC_Os01g57270 | Os01g0781100 | - | Detail |
| CX1g006355 | 1:29,665,071-29,670,391 | + | C1H1g23430 | C2H1g08583 | LOC_Os01g57280 | Os01g0781200 | Pi64 | Detail |
| CX1g001870 | 1:29,671,592-29,675,922 | - | C1H1g05330 | C2H1g19777 | LOC_Os01g57350 | Os01g0782200 | - | Detail |
| CX1g002627 | 1:29,677,619-29,679,782 | - | C1H1g16270 | C2H1g15609 | LOC_Os01g57360 | Os01g0782500 | - | Detail |
| CX1g006567 | 1:29,688,727-29,692,777 | - | C1H1g26913 | C2H1g26173 | LOC_Os01g57370 | Os01g0782800 | OsCNGC15 | Detail |
| CX1g004406 | 1:29,700,186-29,700,571 | - | C1H1g18891 | C2H1g20034 | LOC_Os01g57400 | Os01g0783000 | OsLysMe2 | Detail |
| CX1g002479 | 1:29,701,447-29,703,598 | + | C1H1g11272 | C2H1g22636 | LOC_Os01g57410 | Os01g0783100 | - | Detail |
| CX1g003400 | 1:29,705,765-29,711,911 | - | C1H1g14162 | C2H1g00339 | LOC_Os01g57420 | Os01g0783200 | - | Detail |
| CX1g003974 | 1:29,714,282-29,716,885 | - | C1H1g12309 | C2H1g03808 | LOC_Os01g57440 | Os01g0783400 | - | Detail |
| CX1g005821 | 1:29,719,723-29,720,538 | + | - | - | - | Os05g0501650 | - | Detail |
| CX1g004706 | 1:29,724,243-29,726,063 | + | C1H1g15791 | C2H1g00954 | LOC_Os01g57460 | Os01g0783600 | - | Detail |
| CX1g001288 | 1:29,726,455-29,726,736 | - | C1H1g18932 | - | LOC_Os01g57470 | Os01g0783700 | - | Detail |
| CX1g004924 | 1:29,730,540-29,742,080 | + | C1H1g11033 | C2H1g29910 | LOC_Os01g57490 | Os01g0783900 | SDRLP-11 | Detail |
| CX1g000763 | 1:29,744,485-29,748,555 | + | C1H1g03347 | C2H1g11023 | LOC_Os01g57510 | Os01g0784200 | SDRLK-15 | Detail |