| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g04717 | 4:24,611,743-24,626,944 | - | C1H4g04331 | CX4g033771 | LOC_Os04g48040 | Os04g0568850 | - | Detail |
| C2H4g27476 | 4:24,628,324-24,631,531 | - | C1H4g22901 | CX4g035675 | LOC_Os04g48050 | Os04g0568900 | OsRINGzf1 | Detail |
| C2H4g06051 | 4:24,639,426-24,642,258 | + | C1H4g15838 | CX4g036264 | LOC_Os04g48060 | Os04g0569000 | OsRFC4 | Detail |
| C2H4g02683 | 4:24,643,492-24,649,194 | - | C1H4g17902 | CX4g033862 | LOC_Os04g48070 | Os04g0569100 | ROC4, Roc4 | Detail |
| C2H4g16788 | 4:24,662,482-24,663,894 | + | C1H4g21535 | CX4g035902 | LOC_Os04g48130 | Os04g0569300 | - | Detail |
| C2H4g20649 | 4:24,664,480-24,668,620 | - | C1H4g08980 | CX4g031968 | LOC_Os04g48140 | Os04g0569400 | - | Detail |
| C2H4g00953 | 4:24,680,139-24,682,701 | - | C1H4g04673 | CX4g034977 | LOC_Os04g48160 | Os04g0569900 | - | Detail |
| C2H4g17853 | 4:24,691,650-24,695,483 | - | C1H4g18526 | CX4g033784 | LOC_Os04g48170 | Os04g0570000 | CYP87A3 | Detail |
| C2H4g14427 | 4:24,713,054-24,724,810 | - | C1H4g29930 | CX4g031367 | LOC_Os04g48200 | Os04g0570500 | - | Detail |
| C2H4g22883 | 4:24,725,688-24,725,969 | - | C1H4g29930 | CX4g031367 | LOC_Os04g48200 | Os04g0570600 | - | Detail |
| C2H4g06266 | 4:24,729,155-24,733,008 | - | C1H4g03867 | CX4g033156 | LOC_Os04g48230 | Os04g0570800 | - | Detail |
| C2H4g17221 | 4:24,745,123-24,747,689 | + | C1H4g26163 | CX4g033503 | LOC_Os04g48260 | Os04g0571200 | OsSIRH2-14, OsRFPH2-14 | Detail |
| C2H4g10186 | 4:24,752,021-24,754,484 | + | C1H4g03569 | CX4g033945 | LOC_Os04g48270 | Os04g0571300 | - | Detail |
| C2H4g15919 | 4:24,775,741-24,777,423 | + | C1H4g23534 | CX4g036434 | LOC_Os04g48290 | Os04g0571600 | - | Detail |
| C2H4g00338 | 4:24,794,171-24,796,228 | + | C1H4g17435 | CX4g036388 | LOC_Os04g48310 | Os04g0571800 | - | Detail |
| C2H4g12960 | 4:24,809,241-24,809,861 | + | C1H4g06177 | CX4g036221 | LOC_Os04g48330 | Os04g0572200 | - | Detail |
| C2H4g16947 | 4:24,828,508-24,829,167 | + | C1H4g06177 | CX4g033927 | LOC_Os04g48350 | Os04g0572400 | OsDREB1E | Detail |
| C2H4g15443 | 4:24,834,789-24,837,653 | + | C1H4g03855 | - | LOC_Os04g48360 | Os04g0572500 | - | Detail |
| C2H4g29441 | 4:24,840,867-24,855,980 | + | C1H4g24679 | CX4g034848 | LOC_Os04g48370 | Os04g0572600 | OsNRPD1a, OsNRPD1 | Detail |
| C2H4g24575 | 4:24,858,227-24,862,081 | + | C1H4g25752 | CX2g023056 | LOC_Os04g48375 | Os04g0572700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057224 | 9:780,301-780,659 | - | C1H9g20260 | C2H9g16389 | - | - | - | Detail |
| CX9g055907 | 9:782,385-788,203 | + | C1H9g06955 | C2H9g22729 | LOC_Os09g01650 | Os09g0103800 | - | Detail |
| CX9g057211 | 9:796,369-797,818 | - | - | - | - | - | - | Detail |
| CX9g055815 | 9:808,774-808,947 | + | - | - | - | - | - | Detail |
| CX9g057376 | 9:812,337-815,836 | - | C1H9g22354 | C2H9g16634 | LOC_Os09g01680 | Os09g0104200 | RAD51D, OsRAD51D.3, OsRAD51D, OsRad51D | Detail |
| CX9g056747 | 9:820,146-822,776 | - | - | C2H9g10538 | LOC_Os09g01700 | Os09g0104700 | - | Detail |
| CX9g055802 | 9:832,578-835,421 | - | C1H9g03429 | C2H9g30434 | LOC_Os09g01750 | - | - | Detail |
| CX9g054917 | 9:850,434-854,338 | - | C1H9g13033 | C2H9g17453 | LOC_Os09g01790 | - | - | Detail |
| CX9g056623 | 9:858,075-858,425 | + | - | - | - | - | - | Detail |
| CX9g057402 | 9:865,590-866,360 | - | - | - | LOC_Os09g01880 | Os06g0661000 | - | Detail |
| CX9g055219 | 9:870,339-870,668 | + | - | - | LOC_Os09g01890 | - | - | Detail |
| CX9g056345 | 9:891,991-895,366 | + | C1H9g15386 | C2H9g11873 | LOC_Os12g23430 | - | - | Detail |
| CX9g056984 | 9:907,782-908,219 | + | - | - | - | - | - | Detail |
| CX9g057417 | 9:931,258-931,488 | + | - | - | - | Os07g0616100 | - | Detail |
| CX9g057727 | 9:944,186-945,163 | - | - | C2H9g07049 | LOC_Os09g01960 | Os09g0106700 | - | Detail |
| CX9g056249 | 9:983,151-983,312 | - | - | C2H9g27759 | LOC_Os09g02000 | Os09g0107400 | - | Detail |
| CX9g055240 | 9:985,808-986,023 | + | - | - | - | - | - | Detail |
| CX9g055360 | 9:998,120-999,709 | + | - | C2H9g01644 | - | Os09g0290900 | - | Detail |
| CX9g056897 | 9:1,007,909-1,014,628 | + | C1H9g28229 | C2H9g16224 | LOC_Os09g02130 | Os09g0108400 | - | Detail |
| CX9g058002 | 9:1,025,105-1,030,481 | + | C1H9g14656 | C2H9g00527 | LOC_Os09g02140 | Os09g0108600 | - | Detail |