| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g05219 | 11:41,219-42,516 | - | C1H11g01849 | CX11g011920 | LOC_Os12g01030 | Os11g0100600 | - | Detail |
| C2H11g01700 | 11:44,241-46,005 | - | C1H11g20414 | CX11g013460 | - | - | - | Detail |
| C2H11g04368 | 11:60,985-67,081 | + | C1H11g21634 | CX11g011380 | LOC_Os12g01080 | Os11g0101200 | OsRpp30 | Detail |
| C2H11g10385 | 11:68,016-68,298 | + | C1H12g27411 | - | LOC_Os12g01090 | - | - | Detail |
| C2H11g28209 | 11:69,769-71,083 | + | C1H11g08822 | CX11g011380 | LOC_Os12g01100 | Os11g0101200 | OsRpp30 | Detail |
| C2H11g29422 | 11:95,272-95,883 | + | C1H11g18239 | CX11g010871 | LOC_Os12g01120 | Os11g0102100 | WOX3, OsWOX3, OsNS, OsPRS | Detail |
| C2H11g14954 | 11:106,826-121,261 | + | C1H11g15262 | CX11g013891 | LOC_Os12g01140 | Os11g0102200 | OsPHOT1a | Detail |
| C2H11g23847 | 11:121,531-122,942 | - | C1H11g26777 | CX11g011791 | - | - | - | Detail |
| C2H11g27510 | 11:126,434-129,177 | + | C1H11g17087 | CX12g018399 | LOC_Os12g01160 | Os11g0102500 | - | Detail |
| C2H11g08338 | 11:130,442-133,692 | + | C1H11g29895 | CX11g011515 | LOC_Os12g01170 | Os11g0102600 | - | Detail |
| C2H11g20080 | 11:133,730-137,687 | - | C1H11g00951 | CX11g014575 | LOC_Os12g01180 | Os11g0102700 | - | Detail |
| C2H11g17658 | 11:140,743-147,490 | + | C1H11g19879 | CX11g011926 | LOC_Os12g01190 | Os11g0102800 | OsRINGC2-1 | Detail |
| C2H11g14803 | 11:147,642-155,207 | - | C1H11g30247 | CX11g014886 | LOC_Os12g01200 | Os11g0102900 | - | Detail |
| C2H11g28258 | 11:163,432-168,490 | - | C1H11g15396 | CX11g014869 | LOC_Os12g01220 | Os11g0103100 | - | Detail |
| C2H11g11172 | 11:168,489-170,842 | + | C1H11g15479 | CX11g013052 | LOC_Os12g01230 | Os11g0103400 | - | Detail |
| C2H11g18705 | 11:173,249-175,700 | + | C1H11g30773 | CX11g014836 | LOC_Os11g01260 | Os11g0103550 | - | Detail |
| C2H11g08907 | 11:176,936-181,911 | - | C1H11g29788 | CX11g012146 | LOC_Os12g01240 | Os11g0103700 | - | Detail |
| C2H11g08625 | 11:187,464-191,198 | + | C1H11g28012 | CX11g014836 | LOC_Os12g01250 | Os11g0103800 | - | Detail |
| C2H11g06934 | 11:197,266-202,507 | + | C1H11g15195 | CX11g014082 | LOC_Os12g01350 | Os11g0104220 | - | Detail |
| C2H11g22963 | 11:216,142-221,333 | + | C1H11g27974 | CX11g011532 | LOC_Os12g01360 | Os11g0104300 | D53, D53(D K3), DK3, Dwf34 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057224 | 9:780,301-780,659 | - | C1H9g20260 | C2H9g16389 | - | - | - | Detail |
| CX9g055907 | 9:782,385-788,203 | + | C1H9g06955 | C2H9g22729 | LOC_Os09g01650 | Os09g0103800 | - | Detail |
| CX9g057211 | 9:796,369-797,818 | - | - | - | - | - | - | Detail |
| CX9g055815 | 9:808,774-808,947 | + | - | - | - | - | - | Detail |
| CX9g057376 | 9:812,337-815,836 | - | C1H9g22354 | C2H9g16634 | LOC_Os09g01680 | Os09g0104200 | RAD51D, OsRAD51D.3, OsRAD51D, OsRad51D | Detail |
| CX9g056747 | 9:820,146-822,776 | - | - | C2H9g10538 | LOC_Os09g01700 | Os09g0104700 | - | Detail |
| CX9g055802 | 9:832,578-835,421 | - | C1H9g03429 | C2H9g30434 | LOC_Os09g01750 | - | - | Detail |
| CX9g054917 | 9:850,434-854,338 | - | C1H9g13033 | C2H9g17453 | LOC_Os09g01790 | - | - | Detail |
| CX9g056623 | 9:858,075-858,425 | + | - | - | - | - | - | Detail |
| CX9g057402 | 9:865,590-866,360 | - | - | - | LOC_Os09g01880 | Os06g0661000 | - | Detail |
| CX9g055219 | 9:870,339-870,668 | + | - | - | LOC_Os09g01890 | - | - | Detail |
| CX9g056345 | 9:891,991-895,366 | + | C1H9g15386 | C2H9g11873 | LOC_Os12g23430 | - | - | Detail |
| CX9g056984 | 9:907,782-908,219 | + | - | - | - | - | - | Detail |
| CX9g057417 | 9:931,258-931,488 | + | - | - | - | Os07g0616100 | - | Detail |
| CX9g057727 | 9:944,186-945,163 | - | - | C2H9g07049 | LOC_Os09g01960 | Os09g0106700 | - | Detail |
| CX9g056249 | 9:983,151-983,312 | - | - | C2H9g27759 | LOC_Os09g02000 | Os09g0107400 | - | Detail |
| CX9g055240 | 9:985,808-986,023 | + | - | - | - | - | - | Detail |
| CX9g055360 | 9:998,120-999,709 | + | - | C2H9g01644 | - | Os09g0290900 | - | Detail |
| CX9g056897 | 9:1,007,909-1,014,628 | + | C1H9g28229 | C2H9g16224 | LOC_Os09g02130 | Os09g0108400 | - | Detail |
| CX9g058002 | 9:1,025,105-1,030,481 | + | C1H9g14656 | C2H9g00527 | LOC_Os09g02140 | Os09g0108600 | - | Detail |