| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g23643 | 4:27,842,470-27,843,511 | + | C2H4g06648 | CX4g035639 | LOC_Os04g53390 | Os04g0625400 | - | Detail |
| C1H4g23670 | 4:27,849,908-27,851,053 | + | C2H4g27490 | CX4g032720 | LOC_Os04g53400 | Os04g0625500 | - | Detail |
| C1H4g19888 | 4:27,857,315-27,860,819 | + | C2H4g02286 | CX4g034210 | LOC_Os04g53440 | Os04g0625800 | RBP-L | Detail |
| C1H4g10804 | 4:27,861,819-27,866,432 | + | C2H4g06585 | CX4g032448 | LOC_Os04g53450 | Os04g0625900 | - | Detail |
| C1H4g12185 | 4:27,868,558-27,870,028 | - | C2H4g01070 | - | - | - | - | Detail |
| C1H4g24872 | 4:27,873,633-27,875,775 | - | C2H4g25188 | CX4g032312 | LOC_Os04g53460 | Os04g0626000 | - | Detail |
| C1H4g30264 | 4:27,889,977-27,892,125 | - | C2H4g30422 | CX4g032639 | LOC_Os04g53490 | Os04g0626400 | - | Detail |
| C1H4g19316 | 4:27,899,552-27,904,141 | + | C2H4g04576 | CX4g034763 | LOC_Os04g53496 | Os04g0626450 | - | Detail |
| C1H4g26212 | 4:27,915,466-27,917,686 | + | C2H4g15939 | CX4g034763 | LOC_Os04g53496 | Os04g0626500 | - | Detail |
| C1H4g23228 | 4:27,924,813-27,931,631 | + | C2H4g18160 | CX4g036551 | LOC_Os04g53496 | Os04g0626500 | - | Detail |
| C1H4g15756 | 4:27,931,284-27,935,176 | - | C2H4g27007 | CX4g033542 | LOC_Os04g53510 | Os04g0626600 | - | Detail |
| C1H4g30303 | 4:27,938,106-27,945,300 | - | C2H4g27007 | CX4g033542 | LOC_Os04g53520 | Os04g0479800 | - | Detail |
| C1H4g26337 | 4:27,945,910-27,950,708 | + | C2H4g30483 | CX4g035627 | LOC_Os04g53530 | Os04g0626900 | - | Detail |
| C1H4g28934 | 4:27,950,654-27,958,257 | - | C2H4g26106 | CX4g034251 | LOC_Os04g53540 | Os04g0569100 | ROC4, Roc4 | Detail |
| C1H4g03362 | 4:27,964,138-27,971,991 | - | C2H4g07233 | - | LOC_Os04g53550 | Os04g0627132 | - | Detail |
| C1H4g14911 | 4:27,972,244-27,972,918 | - | C2H4g10303 | CX4g034529 | LOC_Os04g53550 | Os04g0627200 | - | Detail |
| C1H4g23088 | 4:27,977,157-27,977,923 | + | C2H4g14741 | CX4g032258 | LOC_Os04g53560 | Os04g0627300 | - | Detail |
| C1H4g30660 | 4:27,982,417-27,984,005 | - | C2H4g22454 | CX4g034354 | LOC_Os04g53580 | Os04g0627400 | - | Detail |
| C1H4g27710 | 4:27,988,978-27,989,715 | - | - | CX4g032905 | LOC_Os04g53606 | Os04g0627900 | OsSUI1 | Detail |
| C1H4g12581 | 4:27,991,131-27,992,519 | - | C2H4g19362 | CX4g033798 | LOC_Os04g53612 | Os04g0628000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057224 | 9:780,301-780,659 | - | C1H9g20260 | C2H9g16389 | - | - | - | Detail |
| CX9g055907 | 9:782,385-788,203 | + | C1H9g06955 | C2H9g22729 | LOC_Os09g01650 | Os09g0103800 | - | Detail |
| CX9g057211 | 9:796,369-797,818 | - | - | - | - | - | - | Detail |
| CX9g055815 | 9:808,774-808,947 | + | - | - | - | - | - | Detail |
| CX9g057376 | 9:812,337-815,836 | - | C1H9g22354 | C2H9g16634 | LOC_Os09g01680 | Os09g0104200 | RAD51D, OsRAD51D.3, OsRAD51D, OsRad51D | Detail |
| CX9g056747 | 9:820,146-822,776 | - | - | C2H9g10538 | LOC_Os09g01700 | Os09g0104700 | - | Detail |
| CX9g055802 | 9:832,578-835,421 | - | C1H9g03429 | C2H9g30434 | LOC_Os09g01750 | - | - | Detail |
| CX9g054917 | 9:850,434-854,338 | - | C1H9g13033 | C2H9g17453 | LOC_Os09g01790 | - | - | Detail |
| CX9g056623 | 9:858,075-858,425 | + | - | - | - | - | - | Detail |
| CX9g057402 | 9:865,590-866,360 | - | - | - | LOC_Os09g01880 | Os06g0661000 | - | Detail |
| CX9g055219 | 9:870,339-870,668 | + | - | - | LOC_Os09g01890 | - | - | Detail |
| CX9g056345 | 9:891,991-895,366 | + | C1H9g15386 | C2H9g11873 | LOC_Os12g23430 | - | - | Detail |
| CX9g056984 | 9:907,782-908,219 | + | - | - | - | - | - | Detail |
| CX9g057417 | 9:931,258-931,488 | + | - | - | - | Os07g0616100 | - | Detail |
| CX9g057727 | 9:944,186-945,163 | - | - | C2H9g07049 | LOC_Os09g01960 | Os09g0106700 | - | Detail |
| CX9g056249 | 9:983,151-983,312 | - | - | C2H9g27759 | LOC_Os09g02000 | Os09g0107400 | - | Detail |
| CX9g055240 | 9:985,808-986,023 | + | - | - | - | - | - | Detail |
| CX9g055360 | 9:998,120-999,709 | + | - | C2H9g01644 | - | Os09g0290900 | - | Detail |
| CX9g056897 | 9:1,007,909-1,014,628 | + | C1H9g28229 | C2H9g16224 | LOC_Os09g02130 | Os09g0108400 | - | Detail |
| CX9g058002 | 9:1,025,105-1,030,481 | + | C1H9g14656 | C2H9g00527 | LOC_Os09g02140 | Os09g0108600 | - | Detail |