| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g22632 | 5:17,074,215-17,074,625 | - | - | - | - | Os05g0436700 | - | Detail |
| C2H5g18531 | 5:17,083,688-17,087,095 | + | C1H5g29101 | CX5g040178 | LOC_Os05g34220 | Os05g0414200 | - | Detail |
| C2H5g09968 | 5:17,089,047-17,091,116 | - | C1H5g28207 | CX5g041020 | LOC_Os05g34230 | Os05g0414300 | - | Detail |
| C2H5g22407 | 5:17,092,438-17,095,797 | - | C1H5g30847 | CX5g040102 | LOC_Os05g34240 | Os05g0414400 | - | Detail |
| C2H5g11810 | 5:17,098,704-17,101,082 | - | C1H5g05782 | CX5g039340 | LOC_Os05g34260 | Os05g0414501 | - | Detail |
| C2H5g23251 | 5:17,103,540-17,107,066 | - | C1H5g25050 | CX5g040264 | LOC_Os05g34270 | Os05g0414700 | - | Detail |
| C2H5g21994 | 5:17,117,086-17,120,453 | + | C1H5g10718 | CX5g036908 | LOC_Os05g34290 | Os05g0415200 | OsPCS1, PCS1 | Detail |
| C2H5g03155 | 5:17,126,832-17,128,223 | - | C1H5g30603 | CX5g038965 | LOC_Os05g34310 | Os05g0415400 | OsNAC24 | Detail |
| C2H5g01672 | 5:17,135,863-17,141,335 | + | C1H5g05650 | CX5g036727 | LOC_Os05g34320 | Os05g0415700 | - | Detail |
| C2H5g12355 | 5:17,146,454-17,148,748 | + | C1H5g12868 | CX5g039800 | LOC_Os05g34325 | Os05g0415800 | SDF5 | Detail |
| C2H5g04891 | 5:17,158,380-17,161,330 | + | C1H5g18533 | CX5g040810 | LOC_Os05g34330 | Os05g0415900 | - | Detail |
| C2H5g21297 | 5:17,169,088-17,172,562 | + | C1H5g15900 | CX5g040810 | LOC_Os05g34380 | Os05g0416400 | - | Detail |
| C2H5g12818 | 5:17,185,247-17,190,085 | - | C1H5g01316 | CX5g039838 | LOC_Os05g34450 | Os05g0417000 | - | Detail |
| C2H5g07004 | 5:17,204,966-17,210,552 | + | C1H5g11798 | CX5g038947 | LOC_Os05g34460 | Os05g0417100 | OsDeg10, OsDegP7, TCM5 | Detail |
| C2H5g04759 | 5:17,211,253-17,212,680 | + | C1H5g00545 | CX5g039768 | LOC_Os05g34470 | Os05g0417200 | - | Detail |
| C2H5g08539 | 5:17,216,859-17,219,622 | + | C1H5g02957 | CX5g036958 | LOC_Os05g34480 | Os05g0417300 | - | Detail |
| C2H5g04823 | 5:17,226,063-17,226,413 | + | C1H5g23511 | CX5g039968 | LOC_Os05g34500 | Os05g0417600 | - | Detail |
| C2H5g22148 | 5:17,227,910-17,228,227 | + | C1H5g30645 | CX5g037235 | LOC_Os05g34510 | Os05g0417700 | - | Detail |
| C2H5g07813 | 5:17,233,950-17,234,261 | - | C1H5g05293 | CX5g037225 | LOC_Os05g34530 | Os05g0417900 | - | Detail |
| C2H5g11479 | 5:17,240,999-17,246,293 | + | C1H5g17144 | CX5g039245 | LOC_Os05g34540 | Os05g0418000 | OsGDI1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053644 | 8:24,591,694-24,594,154 | - | C1H8g10818 | C2H8g21147 | LOC_Os08g44760 | Os08g0561600 | - | Detail |
| CX8g052072 | 8:24,599,757-24,602,065 | + | C1H8g04025 | C2H8g00495 | LOC_Os08g44770 | Os08g0561700 | - | Detail |
| CX8g052065 | 8:24,602,791-24,603,673 | + | C1H8g12847 | C2H8g16586 | LOC_Os08g44790 | Os08g0561900 | - | Detail |
| CX8g054785 | 8:24,606,301-24,609,785 | + | C1H8g02051 | C2H8g15958 | LOC_Os08g44810 | Os08g0562100 | - | Detail |
| CX8g052423 | 8:24,610,636-24,614,401 | - | C1H8g01104 | C2H8g09587 | LOC_Os08g44820 | Os08g0562200 | - | Detail |
| CX8g052677 | 8:24,617,944-24,618,093 | - | - | - | - | - | - | Detail |
| CX8g052740 | 8:24,621,137-24,622,183 | - | C1H8g07817 | C2H8g19359 | LOC_Os08g44830 | Os08g0562300 | - | Detail |
| CX8g051997 | 8:24,625,086-24,627,211 | - | C1H8g08302 | C2H8g04681 | LOC_Os08g44840 | Os08g0562500 | - | Detail |
| CX8g054619 | 8:24,632,532-24,633,407 | - | - | C2H8g15636 | LOC_Os08g44850 | Os08g0562600 | - | Detail |
| CX8g051865 | 8:24,635,111-24,643,150 | - | C1H8g21304 | C2H8g07605 | LOC_Os08g44860 | Os08g0562700 | - | Detail |
| CX8g050550 | 8:24,645,968-24,647,757 | - | C1H8g21304 | C2H8g05434 | LOC_Os08g44870 | Os08g0562800 | OsMATE34 | Detail |
| CX8g051527 | 8:24,648,612-24,649,055 | + | - | - | LOC_Os03g42860 | - | - | Detail |
| CX8g052222 | 8:24,656,343-24,657,044 | - | C1H8g31850 | C2H8g16564 | LOC_Os08g44910 | Os08g0563200 | OsAHL17 | Detail |
| CX8g051131 | 8:24,666,428-24,667,463 | - | C1H8g17716 | C2H8g04715 | LOC_Os08g44940 | Os08g0563400 | - | Detail |
| CX8g051267 | 8:24,668,097-24,668,573 | + | - | - | - | Os08g0563450 | - | Detail |
| CX8g051184 | 8:24,673,300-24,674,037 | - | C1H8g00176 | C2H8g24631 | LOC_Os08g44950 | Os08g0563500 | - | Detail |
| CX8g051779 | 8:24,677,284-24,677,715 | + | C1H8g04746 | C2H8g04883 | LOC_Os08g44960 | Os08g0565200 | - | Detail |
| CX8g051963 | 8:24,685,929-24,687,437 | + | C1H8g00694 | C2H8g21319 | LOC_Os08g45000 | Os08g0564000 | PT6, OsPT6, PHT1-6, OsPht1;6, OsLPT6:1, OsLPT1, OsPT6:1 | Detail |
| CX8g053338 | 8:24,691,591-24,694,611 | - | C1H8g13892 | C2H8g09665 | LOC_Os08g45010 | Os08g0564100 | - | Detail |
| CX8g050813 | 8:24,712,583-24,714,348 | + | C1H8g09165 | C2H8g23254 | LOC_Os08g45030 | Os08g0564300 | - | Detail |