| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g05159 | 4:8,378,386-8,381,676 | + | C2H4g09540 | CX4g032998 | LOC_Os04g20230 | Os04g0270200 | - | Detail |
| C1H4g20799 | 4:8,385,105-8,398,032 | - | C2H4g06098 | CX4g035940 | LOC_Os04g20220 | Os04g0270100 | - | Detail |
| C1H4g17577 | 4:8,406,137-8,408,769 | - | C2H4g15448 | CX4g035708 | - | Os04g0269700 | - | Detail |
| C1H4g10534 | 4:8,414,720-8,421,905 | - | C2H4g18468 | CX4g032631 | LOC_Os04g20164 | Os04g0269600 | - | Detail |
| C1H4g18182 | 4:8,431,150-8,437,814 | - | C2H4g29933 | CX4g034751 | LOC_Os04g20070 | Os04g0269100 | - | Detail |
| C1H4g04022 | 4:8,465,932-8,466,645 | - | - | CX4g034479 | LOC_Os04g19960 | Os04g0268700 | - | Detail |
| C1H4g03823 | 4:8,514,749-8,518,336 | + | C2H4g28234 | CX4g032254 | LOC_Os04g19800 | Os04g0267600 | - | Detail |
| C1H4g07957 | 4:8,521,970-8,523,556 | + | - | - | LOC_Os04g19790 | Os04g0267250 | - | Detail |
| C1H4g14102 | 4:8,536,278-8,542,253 | - | C2H4g28498 | CX4g031869 | LOC_Os04g19740 | Os04g0266900 | - | Detail |
| C1H4g17553 | 4:8,556,063-8,559,285 | + | C2H4g11331 | - | - | - | - | Detail |
| C1H4g23732 | 4:8,592,810-8,593,118 | + | C2H4g27229 | CX4g032661 | LOC_Os04g19700 | Os04g0266700 | - | Detail |
| C1H4g19173 | 4:8,593,167-8,593,448 | + | C2H4g12107 | CX4g032792 | - | - | - | Detail |
| C1H4g31855 | 4:8,594,000-8,605,592 | + | C2H4g29825 | CX4g035037 | LOC_Os04g19684 | Os04g0266400 | - | Detail |
| C1H4g19454 | 4:8,665,832-8,667,541 | + | - | - | - | - | - | Detail |
| C1H4g00112 | 4:8,786,839-8,789,151 | - | - | CX4g035773 | LOC_Os04g19140 | Os04g0261400 | - | Detail |
| C1H4g10603 | 4:8,813,833-8,814,144 | - | - | - | - | - | - | Detail |
| C1H4g05526 | 4:8,820,248-8,821,474 | + | - | CX4g036189 | LOC_Os04g18790 | Os04g0258900 | - | Detail |
| C1H4g21940 | 4:8,839,060-8,839,899 | + | C2H4g07429 | CX6g042907 | LOC_Os10g31650 | - | - | Detail |
| C1H4g06177 | 4:8,909,030-8,909,416 | + | C2H4g06793 | CX4g036317 | LOC_Os04g18650 | Os04g0257500 | - | Detail |
| C1H4g05617 | 4:9,056,020-9,056,575 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053131 | 8:24,390,886-24,391,986 | - | - | - | - | - | - | Detail |
| CX8g051678 | 8:24,394,559-24,396,330 | + | C1H8g14247 | C2H8g29544 | LOC_Os08g44280 | Os08g0557000 | PIMT1, OsPIMT1 | Detail |
| CX8g050794 | 8:24,397,066-24,398,601 | - | C1H8g19341 | C2H8g12228 | LOC_Os08g44290 | Os08g0557100 | - | Detail |
| CX8g053270 | 8:24,399,548-24,400,567 | - | - | C2H8g08060 | - | Os08g0557200 | - | Detail |
| CX8g053899 | 8:24,403,157-24,404,050 | + | - | C2H8g03387 | LOC_Os08g44310 | - | - | Detail |
| CX8g054736 | 8:24,404,343-24,408,301 | - | C1H8g21859 | C2H8g08957 | LOC_Os08g44320 | Os08g0557400 | - | Detail |
| CX8g051777 | 8:24,408,538-24,412,821 | + | C1H8g11251 | C2H8g20180 | LOC_Os08g44330 | Os08g0557500 | - | Detail |
| CX8g053200 | 8:24,415,112-24,417,909 | + | C1H8g23781 | C2H8g20392 | LOC_Os08g44340 | Os08g0557600 | - | Detail |
| CX8g051253 | 8:24,419,995-24,423,403 | + | C1H8g01772 | C2H8g12373 | LOC_Os08g44350 | Os08g0557700 | AHP1, OHP1, HPt, OsAHP1, Hpt2, Ohp1, OsHP2, OsHpt2, OsHPt2 | Detail |
| CX8g053309 | 8:24,430,409-24,438,306 | + | C1H8g23400 | C2H8g14066 | LOC_Os08g44360 | Os08g0557800 | OsFAR4 | Detail |
| CX8g052319 | 8:24,439,213-24,442,499 | - | C1H8g28313 | C2H8g17353 | LOC_Os08g44370 | Os08g0557900 | - | Detail |
| CX8g050557 | 8:24,445,343-24,447,226 | + | C1H8g11938 | C2H8g10849 | LOC_Os08g44380 | Os08g0558000 | - | Detail |
| CX8g054239 | 8:24,448,032-24,452,785 | - | C1H8g28050 | C2H8g21533 | LOC_Os08g44390 | Os08g0558100 | - | Detail |
| CX8g054438 | 8:24,453,876-24,456,472 | + | C1H8g20889 | C2H8g14733 | LOC_Os08g44400 | Os08g0558200 | OsGRX20 | Detail |
| CX8g053726 | 8:24,457,614-24,458,192 | + | C1H8g04611 | C2H8g02947 | LOC_Os08g44410 | Os08g0558300 | - | Detail |
| CX8g054401 | 8:24,458,603-24,464,672 | - | C1H8g24914 | C2H8g21192 | LOC_Os08g44420 | Os08g0558400 | - | Detail |
| CX8g054264 | 8:24,468,341-24,470,241 | - | C1H8g29932 | C2H8g30252 | LOC_Os08g44430 | Os08g0558600 | - | Detail |
| CX8g051060 | 8:24,471,793-24,475,057 | - | C1H8g16372 | C2H8g04336 | LOC_Os08g44440 | Os08g0558700 | - | Detail |
| CX8g050452 | 8:24,475,378-24,478,482 | + | C1H8g04443 | C2H8g06651 | LOC_Os08g44450 | Os08g0558800 | - | Detail |
| CX8g051182 | 8:24,483,869-24,485,825 | - | C1H8g15584 | C2H8g25077 | LOC_Os08g44470 | Os08g0559000 | - | Detail |