| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g12416 | 1:31,702,167-31,706,617 | - | C2H1g03973 | CX1g000146 | LOC_Os01g61760 | Os01g0834100 | - | Detail |
| C1H1g06212 | 1:31,710,480-31,721,299 | + | C2H1g25411 | CX1g002696 | LOC_Os01g61780 | Os01g0834200 | - | Detail |
| C1H1g30061 | 1:31,728,722-31,730,161 | - | C2H1g11057 | CX1g000392 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| C1H1g07712 | 1:31,731,952-31,736,728 | - | C2H1g10042 | CX1g001710 | LOC_Os01g61814 | Os01g0834600 | - | Detail |
| C1H1g15578 | 1:31,739,248-31,743,641 | + | C2H1g11754 | CX1g001115 | LOC_Os01g61830 | Os01g0834700 | - | Detail |
| C1H1g28438 | 1:31,746,927-31,747,166 | - | C2H1g04024 | CX1g005583 | LOC_Os01g61840 | Os01g0834800 | - | Detail |
| C1H1g29053 | 1:31,755,807-31,765,030 | - | C2H1g07677 | CX1g004964 | LOC_Os01g61860 | Os01g0835000 | - | Detail |
| C1H1g14368 | 1:31,780,490-31,785,814 | + | C2H1g02343 | CX1g001158 | LOC_Os01g61880 | Os01g0835500 | - | Detail |
| C1H1g23056 | 1:31,796,546-31,797,747 | - | C2H1g27745 | CX1g000977 | LOC_Os01g61900 | Os01g0835700 | OsCCT01 | Detail |
| C1H1g04133 | 1:31,802,050-31,805,363 | - | C2H1g21602 | CX1g007240 | LOC_Os01g61910 | Os01g0835800 | - | Detail |
| C1H1g21523 | 1:31,809,401-31,809,712 | + | C2H5g09767 | CX5g040997 | LOC_Os01g61920 | Os01g0835900 | - | Detail |
| C1H1g12123 | 1:31,814,530-31,824,148 | + | C2H1g29300 | CX1g000993 | LOC_Os01g61930 | Os05g0462600 | - | Detail |
| C1H1g13267 | 1:31,831,536-31,833,788 | + | C2H1g27556 | CX1g006810 | LOC_Os01g61940 | Os01g0836600 | OsABCG3 | Detail |
| C1H1g04982 | 1:31,839,610-31,840,164 | - | C2H1g15144 | - | LOC_Os01g61950 | - | - | Detail |
| C1H1g15863 | 1:31,841,733-31,842,944 | - | C2H1g29885 | CX1g001966 | LOC_Os01g61960 | Os01g0836700 | - | Detail |
| C1H1g03833 | 1:31,844,908-31,846,257 | - | C2H1g29885 | CX1g004021 | LOC_Os01g61970 | Os01g0836800 | - | Detail |
| C1H1g17938 | 1:31,849,282-31,849,788 | + | - | - | - | - | - | Detail |
| C1H1g23659 | 1:31,855,439-31,856,533 | + | - | CX1g000026 | LOC_Os01g61980 | Os01g0836900 | - | Detail |
| C1H1g22081 | 1:31,859,405-31,862,509 | - | C2H1g06537 | CX1g004745 | LOC_Os01g61990 | Os01g0837000 | - | Detail |
| C1H1g08351 | 1:31,864,744-31,866,551 | + | C2H1g25983 | CX1g000248 | LOC_Os01g62000 | Os01g0837100 | OsPLL2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053832 | 8:24,168,718-24,172,325 | + | C1H8g29581 | C2H8g09628 | LOC_Os08g43730 | Os08g0551200 | - | Detail |
| CX8g053651 | 8:24,240,082-24,242,657 | - | C1H8g30715 | C2H8g01249 | LOC_Os08g44000 | Os08g0553800 | - | Detail |
| CX8g054033 | 8:24,244,105-24,247,259 | + | C1H8g07721 | C2H8g08420 | LOC_Os08g44010 | Os08g0554000 | - | Detail |
| CX8g051226 | 8:24,248,648-24,252,686 | + | C1H8g05892 | C2H8g21170 | LOC_Os08g44015 | Os08g0554050 | - | Detail |
| CX8g052354 | 8:24,255,135-24,260,339 | + | C1H8g12554 | C2H8g12004 | LOC_Os08g44020 | Os08g0554300 | - | Detail |
| CX8g053522 | 8:24,264,199-24,270,040 | + | C1H8g18391 | C2H8g07560 | LOC_Os08g44040 | Os08g0554300 | - | Detail |
| CX8g053224 | 8:24,273,782-24,282,521 | - | C1H8g14099 | C2H8g12119 | LOC_Os08g44050 | Os08g0554400 | - | Detail |
| CX8g054541 | 8:24,277,819-24,278,178 | + | - | - | - | Os04g0566450 | - | Detail |
| CX8g050740 | 8:24,295,401-24,295,619 | - | - | - | - | - | - | Detail |
| CX8g051535 | 8:24,308,022-24,312,880 | + | C1H8g15443 | C2H8g25295 | LOC_Os08g44150 | Os08g0555200 | - | Detail |
| CX8g053393 | 8:24,315,547-24,324,262 | - | C1H8g17701 | C2H8g08985 | LOC_Os08g44160 | Os08g0555400 | - | Detail |
| CX8g054715 | 8:24,326,648-24,329,890 | + | C1H8g00607 | C2H8g15531 | LOC_Os08g44180 | Os08g0555800 | OsPRD2 | Detail |
| CX8g051231 | 8:24,334,248-24,334,730 | - | C1H8g19480 | C2H8g05201 | LOC_Os08g44190 | Os08g0555700 | - | Detail |
| CX8g053105 | 8:24,340,942-24,345,348 | - | C1H8g16839 | C2H8g08865 | LOC_Os08g44200 | Os08g0556000 | - | Detail |
| CX8g054305 | 8:24,348,352-24,349,446 | + | C1H8g06565 | C2H8g28436 | LOC_Os08g44210 | Os08g0556200 | - | Detail |
| CX8g051149 | 8:24,350,096-24,351,416 | - | C1H8g12261 | C2H8g10445 | LOC_Os08g44220 | Os08g0556300 | - | Detail |
| CX8g050699 | 8:24,360,843-24,365,287 | + | C1H8g17669 | C2H8g25825 | LOC_Os08g44230 | Os08g0556400 | - | Detail |
| CX8g053427 | 8:24,366,243-24,372,788 | + | C1H8g23648 | C2H8g13341 | LOC_Os08g44240 | Os08g0556550 | - | Detail |
| CX8g051972 | 8:24,374,480-24,375,534 | + | C1H8g28824 | C2H8g19899 | LOC_Os08g44250 | Os08g0556600 | - | Detail |
| CX8g051376 | 8:24,377,092-24,385,754 | - | C1H8g08691 | C2H8g05076 | LOC_Os08g44260 | Os08g0556700 | - | Detail |