| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g19241 | 11:3,507,960-3,512,265 | + | C2H11g04878 | CX11g014057 | LOC_Os11g08100 | Os11g0183900 | - | Detail |
| C1H11g29158 | 11:3,516,036-3,516,833 | + | - | - | - | Os11g0184100 | - | Detail |
| C1H11g30718 | 11:3,521,013-3,522,019 | + | C2H11g19537 | - | LOC_Os11g08120 | Os11g0184300 | - | Detail |
| C1H11g24574 | 11:3,524,850-3,525,511 | + | C2H11g08483 | CX9g055632 | LOC_Os09g31430 | Os11g0184300 | - | Detail |
| C1H11g21737 | 11:3,525,578-3,526,383 | + | C2H11g15003 | CX11g013993 | LOC_Os11g08160 | Os11g0184300 | - | Detail |
| C1H11g22341 | 11:3,530,988-3,536,589 | + | C2H11g02113 | CX11g014057 | LOC_Os11g08190 | Os11g0184600 | - | Detail |
| C1H11g14966 | 11:3,541,222-3,541,640 | + | C2H11g09425 | - | LOC_Os11g08180 | Os11g0184600 | - | Detail |
| C1H11g29947 | 11:3,542,233-3,542,923 | + | C2H11g25637 | - | LOC_Os11g08190 | Os11g0184600 | - | Detail |
| C1H11g30694 | 11:3,545,393-3,548,317 | + | C2H11g25637 | - | LOC_Os11g08190 | Os11g0183900 | - | Detail |
| C1H11g25147 | 11:3,550,336-3,552,402 | + | C2H11g25637 | CX11g014057 | LOC_Os11g08200 | Os11g0184800 | OsAsp1 | Detail |
| C1H11g09597 | 11:3,554,634-3,556,836 | - | C2H11g02712 | CX11g013912 | LOC_Os11g08210 | Os11g0184900 | NAC5, OsNAC5, NAC71, ONAC071, ONAC009, ONAC9, ONAC020, ONAC20, OnNAC5*, OnNAC5, OsNAC5/ONAC009 | Detail |
| C1H11g06049 | 11:3,567,206-3,568,194 | + | C2H11g30229 | CX11g014413 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| C1H11g16668 | 11:3,569,196-3,569,507 | + | C2H11g30229 | CX11g010990 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| C1H11g22894 | 11:3,633,288-3,638,155 | + | C2H11g18389 | CX11g013131 | LOC_Os11g08300 | Os11g0186200 | - | Detail |
| C1H11g28283 | 11:3,639,438-3,642,896 | + | C2H11g28689 | CX11g014402 | LOC_Os11g08314 | Os11g0186300 | - | Detail |
| C1H11g04327 | 11:3,643,665-3,644,999 | + | C2H11g07463 | CX11g011762 | LOC_Os11g08314 | Os11g0186300 | - | Detail |
| C1H11g17958 | 11:3,645,662-3,655,613 | - | C2H11g08181 | CX11g012890 | LOC_Os11g08330 | Os11g0186400 | OsPolδ1 | Detail |
| C1H11g07924 | 11:3,660,820-3,661,307 | - | C2H11g08701 | CX11g011992 | - | - | - | Detail |
| C1H11g02795 | 11:3,665,691-3,667,687 | + | C2H11g25550 | CX11g012905 | LOC_Os11g08340 | Os11g0186500 | - | Detail |
| C1H11g17459 | 11:3,685,165-3,686,454 | + | C2H12g10711 | CX11g010865 | LOC_Os11g08370 | Os11g0186800 | OsPHT4;6-1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g051854 | 8:24,070,141-24,071,615 | + | C1H8g24878 | C2H8g08558 | LOC_Os08g43510 | Os08g0517800 | - | Detail |
| CX8g053974 | 8:24,074,923-24,075,957 | + | - | C2H8g11273 | LOC_Os08g43530 | Os08g0529400 | - | Detail |
| CX8g053827 | 8:24,077,450-24,080,606 | + | C1H8g15258 | C2H8g14671 | LOC_Os08g43540 | Os08g0548900 | - | Detail |
| CX8g054666 | 8:24,089,074-24,089,879 | - | C1H8g25532 | C2H8g13865 | LOC_Os08g43550 | Os08g0549000 | OsGL1A, LTF1L1 | Detail |
| CX8g051087 | 8:24,093,984-24,097,714 | - | C1H8g07814 | C2H8g26305 | LOC_Os08g43560 | Os08g0549100 | OsAPX4 | Detail |
| CX8g054057 | 8:24,098,946-24,103,025 | + | C1H8g25836 | C2H8g20260 | LOC_Os08g43570 | Os08g0549200 | - | Detail |
| CX8g052416 | 8:24,103,901-24,106,183 | - | C1H8g26096 | C2H8g00080 | LOC_Os08g43580 | Os08g0549300 | - | Detail |
| CX8g054678 | 8:24,107,099-24,107,710 | - | - | C2H8g25276 | - | - | - | Detail |
| CX8g051412 | 8:24,111,534-24,112,215 | + | C1H8g13181 | C2H8g14557 | LOC_Os08g43600 | Os08g0549600 | OsFD4, bZIP69/OsFD4 | Detail |
| CX8g051494 | 8:24,114,903-24,115,178 | + | - | - | - | - | - | Detail |
| CX8g050861 | 8:24,119,670-24,120,068 | + | - | C2H8g21702 | LOC_Os08g43620 | Os08g0549900 | - | Detail |
| CX8g053798 | 8:24,123,133-24,123,519 | - | - | - | - | Os08g0549950 | - | Detail |
| CX8g052298 | 8:24,126,015-24,129,277 | - | C1H8g01701 | C2H8g09888 | LOC_Os08g43640 | Os08g0550100 | OsRpn3 | Detail |
| CX8g054545 | 8:24,130,681-24,133,748 | - | C1H8g12033 | C2H8g25134 | LOC_Os08g43654 | Os08g0550200 | - | Detail |
| CX8g052043 | 8:24,136,452-24,137,354 | - | - | - | - | - | - | Detail |
| CX8g053945 | 8:24,139,462-24,140,587 | - | C1H8g08100 | C2H8g10091 | LOC_Os08g43670 | Os08g0550400 | - | Detail |
| CX8g053829 | 8:24,146,252-24,151,557 | + | C1H8g22484 | C2H8g00143 | LOC_Os08g43680 | Os08g0550500 | - | Detail |
| CX8g052091 | 8:24,158,389-24,161,125 | + | C1H8g09132 | C2H8g13032 | LOC_Os08g43690 | Os08g0550600 | - | Detail |
| CX8g050521 | 8:24,161,892-24,162,323 | - | - | C2H8g20531 | LOC_Os08g43700 | Os08g0550700 | - | Detail |
| CX8g053735 | 8:24,164,247-24,164,480 | - | - | - | - | Os08g0550850 | - | Detail |