| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g27090 | 3:850,028-850,639 | + | C2H3g30074 | CX3g029231 | LOC_Os03g05590 | Os03g0117900 | - | Detail |
| C1H3g15880 | 3:856,310-860,232 | + | C2H3g15234 | CX3g029442 | LOC_Os03g02660 | Os03g0118100 | - | Detail |
| C1H3g16233 | 3:862,627-865,949 | + | C2H3g07784 | CX3g026262 | LOC_Os03g02670 | Os03g0118200 | - | Detail |
| C1H3g13017 | 3:869,189-872,675 | + | C2H3g27804 | CX3g031203 | LOC_Os03g02680 | Os03g0118400 | - | Detail |
| C1H3g16154 | 3:874,883-875,251 | + | C2H3g24680 | CX3g030967 | LOC_Os03g02685 | Os10g0524300 | OsEMSA1 | Detail |
| C1H3g25055 | 3:876,822-879,754 | + | C2H3g24680 | CX3g030967 | LOC_Os03g02690 | Os03g0118600 | - | Detail |
| C1H3g29819 | 3:880,878-881,723 | + | C2H3g19778 | CX3g029478 | LOC_Os03g02700 | Os10g0524500 | NP1, OsNP1 | Detail |
| C1H3g15623 | 3:881,736-883,129 | + | C2H3g28799 | CX3g029478 | LOC_Os03g02700 | Os03g0118700 | - | Detail |
| C1H3g19576 | 3:891,227-896,308 | + | C2H3g12379 | CX3g027174 | LOC_Os03g02710 | Os03g0118800 | - | Detail |
| C1H3g18152 | 3:897,548-900,663 | + | C2H3g28095 | CX3g029720 | LOC_Os03g02720 | Os03g0118900 | - | Detail |
| C1H3g09297 | 3:901,082-904,667 | - | C2H3g05533 | CX3g029588 | LOC_Os03g02730 | Os03g0119000 | - | Detail |
| C1H3g07728 | 3:905,330-909,405 | - | C2H3g14532 | CX3g029171 | LOC_Os03g02740 | Os03g0119100 | - | Detail |
| C1H3g23288 | 3:912,695-914,947 | - | C2H3g09524 | CX3g030706 | LOC_Os03g02750 | Os03g0119300 | - | Detail |
| C1H3g00618 | 3:927,385-955,923 | + | C2H3g19502 | CX3g030646 | LOC_Os03g03610 | Os03g0119500 | CRR1 | Detail |
| C1H3g23255 | 3:956,674-957,933 | + | C2H3g11241 | CX3g025079 | LOC_Os03g02762 | Os03g0119700 | - | Detail |
| C1H3g13459 | 3:960,163-960,474 | + | C2H3g05811 | CX3g028433 | LOC_Os03g02780 | Os03g0119900 | - | Detail |
| C1H3g04574 | 3:969,029-972,980 | + | C2H3g00993 | CX3g026456 | LOC_Os03g02800 | Os03g0119966 | RIM1, ONAC054, ONAC54, NAC54 | Detail |
| C1H3g21463 | 3:974,336-977,534 | + | C2H3g24146 | - | LOC_Os03g02820 | Os03g0120000 | - | Detail |
| C1H3g16632 | 3:977,917-980,796 | - | C2H3g12012 | CX3g031103 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| C1H3g08934 | 3:982,340-986,225 | - | C2H3g14284 | CX3g026078 | LOC_Os03g02840 | Os03g0120200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053283 | 8:23,803,894-23,808,010 | + | C1H8g07384 | C2H8g01097 | LOC_Os08g43170 | Os08g0544900 | - | Detail |
| CX8g051970 | 8:23,808,684-23,810,912 | + | - | - | - | Os08g0545101 | - | Detail |
| CX8g053565 | 8:23,816,913-23,818,970 | + | C1H8g21387 | C2H8g28379 | LOC_Os08g43190 | Os08g0545200 | - | Detail |
| CX8g052373 | 8:23,821,619-23,822,329 | - | C1H8g12897 | C2H8g09144 | LOC_Os08g43200 | Os08g0545500 | - | Detail |
| CX8g051483 | 8:23,824,532-23,825,296 | - | C1H8g11330 | C2H8g13989 | LOC_Os08g43210 | Os08g0474000 | OsERF104 | Detail |
| CX8g051576 | 8:23,827,499-23,827,801 | - | - | - | LOC_Os08g38430 | - | - | Detail |
| CX8g053237 | 8:23,828,321-23,830,117 | - | C1H8g21411 | C2H8g11273 | LOC_Os08g43220 | Os08g0529400 | - | Detail |
| CX8g052616 | 8:23,831,022-23,832,691 | + | C1H8g05120 | C2H8g05350 | LOC_Os08g43230 | Os08g0545700 | - | Detail |
| CX8g053436 | 8:23,835,706-23,838,240 | - | C1H8g21637 | C2H10g07228 | LOC_Os11g39660 | Os02g0513700 | - | Detail |
| CX8g054366 | 8:23,849,142-23,850,722 | + | - | - | - | Os08g0546000 | - | Detail |
| CX8g054493 | 8:23,852,850-23,853,023 | - | - | - | - | - | - | Detail |
| CX8g054122 | 8:23,862,406-23,863,412 | - | C1H8g31712 | C2H8g28266 | LOC_Os08g43270 | Os08g0546100 | OsBAG2 | Detail |
| CX8g054607 | 8:23,869,248-23,869,541 | + | - | C2H8g14061 | LOC_Os08g43290 | Os08g0546300 | - | Detail |
| CX8g051400 | 8:23,870,410-23,875,684 | - | C1H8g15784 | C2H8g20009 | LOC_Os08g43300 | Os08g0546400 | - | Detail |
| CX8g054644 | 8:23,876,652-23,879,178 | - | C1H8g00699 | C2H8g03450 | LOC_Os08g43320 | Os08g0546700 | - | Detail |
| CX8g053332 | 8:23,883,418-23,883,759 | - | C1H4g09558 | C2H5g17893 | - | Os07g0631500 | - | Detail |
| CX8g053852 | 8:23,883,850-23,886,802 | - | C1H8g29667 | C2H8g20729 | LOC_Os08g43334 | Os08g0546800 | OsHsfB2b | Detail |
| CX8g054402 | 8:23,897,012-23,897,632 | + | - | - | - | - | - | Detail |
| CX8g054759 | 8:23,901,431-23,903,891 | - | C1H8g02824 | C2H8g20120 | LOC_Os08g43350 | Os08g0546900 | - | Detail |
| CX8g050513 | 8:23,905,290-23,905,553 | - | - | - | - | - | - | Detail |