| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g26850 | 5:12,479,801-12,484,786 | - | C2H5g12100 | CX5g040823 | LOC_Os05g26890 | Os05g0333200 | D1, RGA1 | Detail |
| C1H5g09873 | 5:12,505,097-12,509,299 | - | C2H5g13294 | CX5g039023 | LOC_Os05g26926 | Os05g0334400 | OsDjA8, OsDjA7/8 | Detail |
| C1H5g26652 | 5:12,517,998-12,519,299 | - | C2H5g05539 | CX5g039430 | LOC_Os05g26940 | Os05g0334750 | - | Detail |
| C1H5g14628 | 5:12,524,654-12,531,633 | - | C2H5g00998 | CX5g039567 | LOC_Os05g26954 | Os05g0335100 | - | Detail |
| C1H5g28741 | 5:12,543,862-12,544,554 | + | C2H5g01656 | CX5g039300 | LOC_Os05g27000 | Os05g0335500 | - | Detail |
| C1H5g13136 | 5:12,551,896-12,560,777 | - | C2H5g11593 | CX5g039294 | LOC_Os05g27010 | Os05g0335800 | - | Detail |
| C1H5g08274 | 5:12,571,128-12,572,595 | - | C2H5g29679 | CX5g040542 | LOC_Os05g27090 | Os05g0337200 | - | Detail |
| C1H5g13307 | 5:12,587,298-12,590,018 | - | C2H5g27066 | CX5g038207 | LOC_Os05g27100 | Os05g0337400 | - | Detail |
| C1H5g16890 | 5:12,643,183-12,652,710 | + | C2H5g06947 | CX5g040973 | LOC_Os05g27304 | Os05g0338900 | - | Detail |
| C1H5g20164 | 5:12,653,188-12,659,388 | - | C2H5g16002 | CX5g040584 | LOC_Os05g27320 | Os05g0339000 | - | Detail |
| C1H5g07750 | 5:12,673,437-12,674,871 | + | C2H5g15328 | CX5g039225 | LOC_Os05g27340 | Os05g0339200 | - | Detail |
| C1H5g13370 | 5:12,686,781-12,687,551 | - | C2H1g23312 | CX12g016277 | - | - | - | Detail |
| C1H5g30721 | 5:12,714,916-12,716,721 | - | - | CX5g037597 | LOC_Os06g40420 | Os01g0150950 | - | Detail |
| C1H5g05577 | 5:12,719,799-12,722,730 | + | C2H5g14220 | CX5g036883 | LOC_Os05g27500 | Os05g0341100 | - | Detail |
| C1H5g03022 | 5:12,737,464-12,742,375 | - | C2H5g02870 | CX5g040935 | LOC_Os05g26890 | Os05g0333200 | D1, RGA1 | Detail |
| C1H5g06416 | 5:12,744,527-12,747,850 | - | C2H5g23486 | CX5g038002 | LOC_Os05g27530 | Os05g0341600 | - | Detail |
| C1H5g16606 | 5:12,766,052-12,768,659 | - | C2H5g01175 | CX5g037918 | LOC_Os05g27580 | Os05g0342000 | - | Detail |
| C1H5g03243 | 5:12,769,223-12,771,791 | - | C2H5g01175 | CX5g037918 | LOC_Os05g27580 | - | - | Detail |
| C1H5g21954 | 5:12,779,704-12,780,246 | - | C2H5g01175 | CX5g036953 | LOC_Os05g27590 | Os05g0342100 | - | Detail |
| C1H5g14668 | 5:12,797,273-12,800,923 | + | C2H5g27836 | CX5g037297 | LOC_Os05g27660 | Os05g0342900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g051824 | 8:22,982,054-22,982,224 | - | - | - | - | - | - | Detail |
| CX8g053643 | 8:22,982,544-22,991,723 | + | C1H8g12268 | C2H8g00708 | LOC_Os08g41880 | Os08g0531000 | - | Detail |
| CX8g052439 | 8:22,995,357-22,999,620 | + | C1H8g21991 | C2H8g04694 | LOC_Os08g41890 | Os08g0531100 | - | Detail |
| CX8g051468 | 8:23,000,499-23,009,478 | - | C1H8g09979 | C2H8g01625 | LOC_Os08g41900 | Os08g0531200 | - | Detail |
| CX8g052662 | 8:23,011,648-23,014,711 | + | C1H8g07680 | C2H8g08803 | LOC_Os08g41910 | Os08g0531300 | - | Detail |
| CX8g054225 | 8:23,019,134-23,019,379 | + | - | - | - | - | - | Detail |
| CX8g054055 | 8:23,035,881-23,040,632 | + | C1H8g07406 | C2H8g09382 | LOC_Os08g41940 | Os08g0531600 | GW8, SPL16, OsSPL16, SLP1, qGW8 | Detail |
| CX8g051785 | 8:23,042,657-23,046,670 | + | C1H8g13771 | C2H8g21568 | LOC_Os08g41950 | Os08g0531700 | OsMADS7 | Detail |
| CX8g054094 | 8:23,063,334-23,063,740 | - | - | - | - | - | - | Detail |
| CX8g053210 | 8:23,064,436-23,064,591 | + | - | - | - | - | - | Detail |
| CX8g053167 | 8:23,066,689-23,069,144 | - | C1H8g08285 | C2H8g17910 | LOC_Os08g41990 | Os08g0532200 | - | Detail |
| CX8g053084 | 8:23,070,520-23,072,371 | - | C1H8g24037 | C2H8g02797 | LOC_Os08g42000 | Os08g0532300 | - | Detail |
| CX8g052142 | 8:23,073,052-23,077,698 | + | C1H8g28249 | C2H8g11849 | LOC_Os08g42010 | Os08g0532400 | - | Detail |
| CX8g054103 | 8:23,078,528-23,080,249 | + | C1H8g18516 | C2H8g27363 | LOC_Os08g42020 | Os08g0532500 | - | Detail |
| CX8g051598 | 8:23,081,703-23,081,976 | + | - | - | - | Os08g0532600 | - | Detail |
| CX8g052148 | 8:23,082,459-23,084,940 | - | C1H8g07467 | C2H8g09923 | LOC_Os08g42030 | Os08g0532700 | - | Detail |
| CX8g051221 | 8:23,089,941-23,092,363 | - | C1H8g23184 | C2H8g26146 | LOC_Os08g42040 | Os08g0532800 | - | Detail |
| CX8g053088 | 8:23,095,157-23,097,500 | - | C1H8g20451 | C2H8g06409 | LOC_Os08g42050 | Os08g0532900 | - | Detail |
| CX8g051921 | 8:23,106,478-23,108,831 | + | C1H8g12569 | C2H8g14019 | LOC_Os08g42080 | Os08g0533300 | - | Detail |
| CX8g054065 | 8:23,130,182-23,133,464 | + | C1H8g00182 | C2H8g14666 | LOC_Os08g42100 | Os08g0533600 | - | Detail |