| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g11742 | 2:5,273,597-5,275,375 | + | C1H2g24396 | CX2g021980 | LOC_Os02g10800 | Os02g0202400 | BT1-1, OsBT1-1, OsEnS-29 | Detail |
| C2H2g19152 | 2:5,276,189-5,277,880 | - | C1H2g08933 | CX2g024114 | LOC_Os02g10810 | Os02g0202500 | - | Detail |
| C2H2g03245 | 2:5,280,679-5,283,557 | - | C1H2g01124 | CX2g021583 | LOC_Os02g10820 | Os02g0202600 | - | Detail |
| C2H2g06319 | 2:5,284,423-5,289,562 | - | C1H2g31302 | CX2g022814 | LOC_Os02g10830 | Os02g0202700 | OsSAT1;2 | Detail |
| C2H2g07043 | 2:5,291,017-5,294,153 | - | C1H2g29373 | CX2g019052 | LOC_Os02g10850 | Os02g0202900 | - | Detail |
| C2H2g24991 | 2:5,296,406-5,298,717 | - | C1H2g02349 | CX2g019052 | LOC_Os02g10860 | Os02g0203000 | OsHY5L1, OsbZIP18 | Detail |
| C2H2g13298 | 2:5,322,255-5,323,208 | - | - | - | - | Os02g0578201 | - | Detail |
| C2H2g10759 | 2:5,330,786-5,335,148 | - | C1H2g24176 | CX2g020524 | LOC_Os02g10900 | Os02g0203500 | RLS1 | Detail |
| C2H2g18458 | 2:5,338,312-5,339,617 | - | C1H2g09288 | CX2g021071 | LOC_Os02g10920 | Os02g0203700 | SRZ1 | Detail |
| C2H2g20592 | 2:5,353,511-5,361,697 | + | C1H2g01355 | CX2g021033 | LOC_Os02g10970 | Os02g0121300 | LRT2, CYC2, cyc2*, cyc2, OsCYP2, Cyp2, OsCYP19-2, CYP19-2, OsCYP-2, OsCyp2-P, OsCyp2, OsCYP19-1, LRT2/OsCYP2, lrt2*, lrt2 | Detail |
| C2H2g16217 | 2:5,363,787-5,366,941 | + | C1H2g02729 | CX2g020882 | LOC_Os02g10990 | Os02g0204400 | - | Detail |
| C2H2g15057 | 2:5,370,856-5,372,360 | + | C1H2g29802 | CX2g024407 | LOC_Os02g11000 | Os02g0204500 | - | Detail |
| C2H2g26988 | 2:5,391,116-5,393,386 | - | C1H2g04626 | CX2g022229 | LOC_Os02g11020 | Os02g0204700 | - | Detail |
| C2H2g03770 | 2:5,423,064-5,425,361 | - | C1H2g15482 | CX2g019164 | LOC_Os02g11030 | Os02g0205000 | - | Detail |
| C2H2g05927 | 2:5,426,667-5,427,963 | - | C1H2g23876 | CX2g022500 | LOC_Os02g11040 | Os02g0205200 | - | Detail |
| C2H2g06065 | 2:5,433,561-5,438,148 | - | C1H2g25099 | CX2g023949 | LOC_Os02g11050 | Os02g0205300 | - | Detail |
| C2H2g04587 | 2:5,440,616-5,445,478 | + | C1H2g05033 | CX2g022352 | LOC_Os02g11060 | Os02g0205400 | - | Detail |
| C2H2g22003 | 2:5,446,223-5,447,903 | - | C1H2g08007 | CX2g023216 | LOC_Os02g11070 | Os02g0205500 | - | Detail |
| C2H2g16132 | 2:5,478,867-5,480,336 | - | C1H2g21297 | CX2g022369 | LOC_Os02g11110 | Os02g0206100 | - | Detail |
| C2H2g24159 | 2:5,485,258-5,486,748 | - | C1H2g21297 | CX2g022369 | LOC_Os02g11130 | Os02g0206400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g051208 | 8:22,122,350-22,124,638 | + | C1H8g13566 | C2H8g01912 | LOC_Os08g40120 | Os08g0512100 | - | Detail |
| CX8g053994 | 8:22,132,835-22,133,980 | + | C1H8g25106 | C2H8g13020 | LOC_Os08g40130 | Os08g0512200 | - | Detail |
| CX8g053394 | 8:22,134,932-22,137,885 | + | C1H8g00693 | C2H8g21906 | LOC_Os08g40140 | Os08g0512300 | - | Detail |
| CX8g053561 | 8:22,138,895-22,142,040 | - | C1H8g20441 | C2H8g05099 | LOC_Os08g40150 | Os08g0512400 | OsAHL16 | Detail |
| CX8g050659 | 8:22,149,146-22,151,370 | + | C1H8g06615 | C2H8g28028 | LOC_Os08g40160 | Os08g0512500 | - | Detail |
| CX8g050792 | 8:22,152,916-22,154,512 | + | C1H8g24588 | C2H8g01482 | LOC_Os08g40170 | Os08g0512600 | CDKB2;1, Orysa;CDKB2;1, OsCDKB2;1, cdc2Os3, Orysa;CDKB;2 | Detail |
| CX8g051014 | 8:22,159,875-22,163,603 | + | C1H8g03467 | C2H8g01373 | LOC_Os08g40180 | Os08g0512700 | - | Detail |
| CX8g054142 | 8:22,170,919-22,171,509 | - | - | - | - | Os08g0513051 | - | Detail |
| CX8g054165 | 8:22,171,066-22,174,429 | + | C1H8g01845 | C2H8g24125 | LOC_Os08g40200 | Os08g0513000 | - | Detail |
| CX8g050443 | 8:22,175,698-22,180,794 | + | C1H8g14574 | C2H8g25678 | LOC_Os08g40230 | Os08g0513300 | - | Detail |
| CX8g053430 | 8:22,191,252-22,197,809 | + | C1H8g02817 | C2H8g07807 | LOC_Os08g40250 | Os08g0513600 | - | Detail |
| CX8g051853 | 8:22,212,090-22,216,455 | + | C1H8g07902 | C2H8g10681 | LOC_Os08g40260 | Os08g0513700 | - | Detail |
| CX8g053302 | 8:22,223,211-22,226,284 | + | C1H8g20761 | C2H8g16589 | LOC_Os08g40270 | Os08g0514000 | - | Detail |
| CX8g054156 | 8:22,228,324-22,231,634 | + | C1H8g14426 | C2H8g21861 | LOC_Os08g40280 | Os08g0514100 | - | Detail |
| CX8g054758 | 8:22,234,849-22,235,868 | - | C1H8g01546 | C2H8g14662 | LOC_Os08g40380 | Os08g0515000 | - | Detail |
| CX8g053954 | 8:22,243,107-22,244,102 | - | C1H8g22798 | C2H8g06813 | LOC_Os08g40380 | Os08g0515000 | - | Detail |
| CX8g051939 | 8:22,253,904-22,255,026 | - | C1H8g04520 | C2H8g29882 | LOC_Os08g40390 | Os08g0515000 | - | Detail |
| CX8g051752 | 8:22,259,339-22,259,791 | + | - | - | - | - | - | Detail |
| CX8g050700 | 8:22,263,266-22,264,040 | - | - | - | - | - | - | Detail |
| CX8g053908 | 8:22,267,408-22,270,775 | + | C1H8g00343 | C2H8g25508 | LOC_Os08g40420 | Os08g0515700 | - | Detail |