| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g16488 | 3:29,354,414-29,357,450 | - | C2H3g12552 | CX3g028552 | LOC_Os03g55180 | Os03g0759000 | - | Detail |
| C1H3g23489 | 3:29,364,287-29,366,215 | + | C2H3g13001 | CX3g026932 | LOC_Os03g55200 | Os03g0759500 | OsORC5 | Detail |
| C1H3g02617 | 3:29,376,896-29,381,336 | + | C2H3g21370 | CX3g030027 | LOC_Os03g55220 | Os03g0759700 | - | Detail |
| C1H3g22708 | 3:29,387,593-29,389,915 | + | C2H3g27540 | CX3g027892 | LOC_Os03g55230 | Os03g0760000 | - | Detail |
| C1H3g12152 | 3:29,394,387-29,397,068 | + | C2H3g20624 | CX3g030489 | LOC_Os03g55240 | Os03g0760200 | Bel, CYP81A6 | Detail |
| C1H3g10305 | 3:29,399,088-29,401,485 | + | C2H3g09774 | CX3g026015 | LOC_Os03g55250 | Os03g0760300 | - | Detail |
| C1H3g04584 | 3:29,403,177-29,406,764 | + | C2H3g11478 | CX3g029417 | LOC_Os03g55260 | Os03g0760500 | - | Detail |
| C1H3g09452 | 3:29,407,238-29,410,200 | - | C2H3g24493 | CX3g029986 | LOC_Os03g55270 | Os03g0760600 | - | Detail |
| C1H3g27656 | 3:29,412,834-29,416,072 | + | C2H3g08027 | CX3g030209 | LOC_Os03g55280 | Os03g0760700 | - | Detail |
| C1H3g11879 | 3:29,417,912-29,418,299 | - | C2H3g21109 | CX3g027262 | LOC_Os03g55290 | Os03g0760800 | GASR1, OsGASR1 | Detail |
| C1H3g27713 | 3:29,421,647-29,423,189 | - | C2H3g17978 | CX3g026450 | LOC_Os03g55310 | Os03g0761000 | - | Detail |
| C1H3g09903 | 3:29,423,755-29,426,376 | - | C2H3g01980 | CX3g026536 | LOC_Os03g55320 | Os03g0761100 | - | Detail |
| C1H3g13690 | 3:29,428,193-29,431,673 | - | C2H3g06672 | CX3g026537 | LOC_Os03g55330 | Os03g0761200 | - | Detail |
| C1H3g30024 | 3:29,447,758-29,452,694 | + | C2H3g12099 | CX3g028991 | LOC_Os03g55360 | Os03g0761700 | - | Detail |
| C1H3g06743 | 3:29,455,275-29,459,139 | + | C2H3g13639 | CX3g030441 | LOC_Os03g55380 | Os03g0761900 | - | Detail |
| C1H3g04781 | 3:29,461,822-29,467,494 | - | C2H3g22708 | CX3g027555 | LOC_Os03g55389 | Os03g0207300 | - | Detail |
| C1H3g13239 | 3:29,469,231-29,470,015 | - | C2H3g06124 | CX3g029923 | LOC_Os03g55400 | Os03g0762100 | - | Detail |
| C1H3g15054 | 3:29,478,120-29,479,413 | + | C2H3g03334 | CX3g027273 | LOC_Os03g55410 | Os03g0762300 | - | Detail |
| C1H3g30848 | 3:29,482,962-29,485,655 | + | C2H3g28441 | CX3g028085 | LOC_Os03g55420 | Os03g0762400 | - | Detail |
| C1H3g27778 | 3:29,490,798-29,491,090 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g051208 | 8:22,122,350-22,124,638 | + | C1H8g13566 | C2H8g01912 | LOC_Os08g40120 | Os08g0512100 | - | Detail |
| CX8g053994 | 8:22,132,835-22,133,980 | + | C1H8g25106 | C2H8g13020 | LOC_Os08g40130 | Os08g0512200 | - | Detail |
| CX8g053394 | 8:22,134,932-22,137,885 | + | C1H8g00693 | C2H8g21906 | LOC_Os08g40140 | Os08g0512300 | - | Detail |
| CX8g053561 | 8:22,138,895-22,142,040 | - | C1H8g20441 | C2H8g05099 | LOC_Os08g40150 | Os08g0512400 | OsAHL16 | Detail |
| CX8g050659 | 8:22,149,146-22,151,370 | + | C1H8g06615 | C2H8g28028 | LOC_Os08g40160 | Os08g0512500 | - | Detail |
| CX8g050792 | 8:22,152,916-22,154,512 | + | C1H8g24588 | C2H8g01482 | LOC_Os08g40170 | Os08g0512600 | CDKB2;1, Orysa;CDKB2;1, OsCDKB2;1, cdc2Os3, Orysa;CDKB;2 | Detail |
| CX8g051014 | 8:22,159,875-22,163,603 | + | C1H8g03467 | C2H8g01373 | LOC_Os08g40180 | Os08g0512700 | - | Detail |
| CX8g054142 | 8:22,170,919-22,171,509 | - | - | - | - | Os08g0513051 | - | Detail |
| CX8g054165 | 8:22,171,066-22,174,429 | + | C1H8g01845 | C2H8g24125 | LOC_Os08g40200 | Os08g0513000 | - | Detail |
| CX8g050443 | 8:22,175,698-22,180,794 | + | C1H8g14574 | C2H8g25678 | LOC_Os08g40230 | Os08g0513300 | - | Detail |
| CX8g053430 | 8:22,191,252-22,197,809 | + | C1H8g02817 | C2H8g07807 | LOC_Os08g40250 | Os08g0513600 | - | Detail |
| CX8g051853 | 8:22,212,090-22,216,455 | + | C1H8g07902 | C2H8g10681 | LOC_Os08g40260 | Os08g0513700 | - | Detail |
| CX8g053302 | 8:22,223,211-22,226,284 | + | C1H8g20761 | C2H8g16589 | LOC_Os08g40270 | Os08g0514000 | - | Detail |
| CX8g054156 | 8:22,228,324-22,231,634 | + | C1H8g14426 | C2H8g21861 | LOC_Os08g40280 | Os08g0514100 | - | Detail |
| CX8g054758 | 8:22,234,849-22,235,868 | - | C1H8g01546 | C2H8g14662 | LOC_Os08g40380 | Os08g0515000 | - | Detail |
| CX8g053954 | 8:22,243,107-22,244,102 | - | C1H8g22798 | C2H8g06813 | LOC_Os08g40380 | Os08g0515000 | - | Detail |
| CX8g051939 | 8:22,253,904-22,255,026 | - | C1H8g04520 | C2H8g29882 | LOC_Os08g40390 | Os08g0515000 | - | Detail |
| CX8g051752 | 8:22,259,339-22,259,791 | + | - | - | - | - | - | Detail |
| CX8g050700 | 8:22,263,266-22,264,040 | - | - | - | - | - | - | Detail |
| CX8g053908 | 8:22,267,408-22,270,775 | + | C1H8g00343 | C2H8g25508 | LOC_Os08g40420 | Os08g0515700 | - | Detail |