| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g12219 | 3:22,325,631-22,327,930 | - | C2H3g20166 | CX3g028574 | LOC_Os03g42320 | Os03g0620800 | - | Detail |
| C1H3g22508 | 3:22,339,513-22,345,748 | + | C2H3g02303 | CX3g028555 | LOC_Os03g42350 | Os03g0621400 | - | Detail |
| C1H3g04432 | 3:22,352,614-22,357,617 | + | C2H3g25619 | CX3g025711 | LOC_Os03g42370 | Os03g0621600 | - | Detail |
| C1H3g02847 | 3:22,359,845-22,361,199 | + | C2H3g10252 | CX3g025711 | LOC_Os03g42370 | Os03g0621650 | - | Detail |
| C1H3g27507 | 3:22,364,160-22,368,383 | + | C2H3g03230 | CX3g025711 | LOC_Os03g42410 | Os03g0621900 | - | Detail |
| C1H3g24168 | 3:22,375,301-22,381,885 | + | C2H3g25799 | CX3g026756 | LOC_Os03g42430 | Os03g0622200 | - | Detail |
| C1H3g21229 | 3:22,384,189-22,384,574 | - | C2H3g07291 | CX3g029697 | LOC_Os03g42440 | Os03g0622600 | - | Detail |
| C1H3g08904 | 3:22,400,139-22,400,521 | - | C2H3g28170 | CX3g029697 | LOC_Os03g42480 | Os03g0622600 | - | Detail |
| C1H3g29338 | 3:22,407,131-22,407,838 | + | C2H3g03196 | CX3g025485 | LOC_Os03g42520 | Os03g0623100 | - | Detail |
| C1H3g27916 | 3:22,458,560-22,468,533 | + | C2H3g21699 | CX3g030736 | LOC_Os03g42569 | Os03g0624000 | - | Detail |
| C1H3g08494 | 3:22,493,959-22,495,899 | + | C2H3g25313 | CX3g028370 | LOC_Os03g42630 | Os03g0624600 | - | Detail |
| C1H3g16137 | 3:22,499,711-22,505,056 | + | C2H3g09083 | CX3g027964 | LOC_Os03g42650 | Os03g0624800 | - | Detail |
| C1H3g14712 | 3:22,555,640-22,566,779 | - | C2H3g06917 | CX3g025039 | LOC_Os03g42750 | Os03g0625700 | OsSEC3A | Detail |
| C1H3g19655 | 3:22,571,599-22,573,365 | - | - | - | - | - | - | Detail |
| C1H3g07578 | 3:22,574,713-22,578,021 | + | C2H3g29064 | CX3g029759 | LOC_Os03g42760 | Os03g0625800 | - | Detail |
| C1H3g16517 | 3:22,579,774-22,586,327 | - | C2H3g01975 | CX3g027078 | LOC_Os03g42770 | Os03g0625900 | - | Detail |
| C1H3g21514 | 3:22,592,933-22,595,710 | + | C2H3g08723 | CX3g029343 | LOC_Os03g42780 | Os03g0625933 | - | Detail |
| C1H3g29387 | 3:22,596,138-22,596,857 | + | C2H3g20687 | CX3g029343 | LOC_Os03g42780 | Os03g0626000 | - | Detail |
| C1H3g27155 | 3:22,605,196-22,608,351 | + | C2H3g23218 | CX3g030994 | LOC_Os03g42790 | Os03g0626100 | qGL3.5 | Detail |
| C1H3g08632 | 3:22,618,709-22,620,596 | + | C2H3g15721 | CX3g030519 | LOC_Os03g42810 | Os03g0626500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g051798 | 8:21,670,490-21,675,225 | + | C1H8g30228 | C2H8g16030 | LOC_Os08g39380 | Os08g0503800 | RCN11, Xyl, OsXylT, RCN11/OsXylT | Detail |
| CX8g051303 | 8:21,681,017-21,681,190 | + | - | - | - | Os02g0188201 | - | Detail |
| CX8g051882 | 8:21,684,980-21,685,129 | - | - | - | - | Os07g0616100 | - | Detail |
| CX8g052201 | 8:21,688,148-21,691,163 | + | C1H8g09278 | C2H8g14205 | LOC_Os08g39390 | Os08g0504000 | - | Detail |
| CX8g051256 | 8:21,698,309-21,698,933 | + | - | - | - | - | - | Detail |
| CX8g052020 | 8:21,714,475-21,719,305 | - | C1H8g18887 | C2H8g03769 | LOC_Os08g39420 | Os08g0504400 | - | Detail |
| CX8g053241 | 8:21,721,473-21,721,874 | - | - | - | - | - | - | Detail |
| CX8g054735 | 8:21,723,863-21,731,632 | + | C1H8g31169 | C2H8g01958 | LOC_Os08g39440 | Os08g0504600 | - | Detail |
| CX8g053940 | 8:21,740,261-21,740,773 | + | C1H8g08213 | C2H8g27106 | LOC_Os08g39450 | Os08g0504700 | SAP11, OsDOG, OsSAP11 | Detail |
| CX8g054682 | 8:21,750,033-21,751,244 | - | - | - | LOC_Os08g40480 | - | - | Detail |
| CX8g054076 | 8:21,752,174-21,753,418 | - | - | C2H8g15906 | LOC_Os08g35920 | Os08g0225900 | - | Detail |
| CX8g053398 | 8:21,758,494-21,759,749 | + | C1H8g25456 | C2H8g22594 | LOC_Os08g39460 | Os08g0504800 | - | Detail |
| CX8g051056 | 8:21,765,324-21,765,551 | - | - | C2H8g29790 | LOC_Os08g39530 | Os08g0505700 | - | Detail |
| CX8g053863 | 8:21,783,283-21,786,109 | + | C1H8g25246 | C2H8g29492 | LOC_Os08g39490 | Os08g0505200 | - | Detail |
| CX8g052550 | 8:21,789,234-21,790,470 | - | C1H8g21369 | C2H8g10032 | LOC_Os08g39500 | Os08g0505300 | - | Detail |
| CX8g051790 | 8:21,797,684-21,798,193 | + | - | C2H8g29046 | LOC_Os08g39520 | - | - | Detail |
| CX8g051594 | 8:21,801,835-21,802,050 | - | - | C2H8g29790 | LOC_Os08g39530 | Os08g0505700 | - | Detail |
| CX8g053102 | 8:21,809,280-21,809,622 | - | - | - | - | - | - | Detail |
| CX8g051263 | 8:21,823,995-21,824,252 | - | - | - | - | - | - | Detail |
| CX8g051484 | 8:21,833,268-21,834,672 | - | - | - | - | - | - | Detail |