| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g18398 | 5:4,105,017-4,109,120 | + | C2H5g11480 | CX5g037016 | LOC_Os05g08960 | Os05g0182500 | - | Detail |
| C1H5g07949 | 5:4,109,874-4,115,446 | + | C2H5g27795 | CX5g038948 | LOC_Os05g08970 | Os05g0182600 | - | Detail |
| C1H5g02741 | 5:4,117,676-4,122,690 | + | C2H5g12653 | CX5g038774 | LOC_Os05g08980 | Os05g0182700 | - | Detail |
| C1H5g31761 | 5:4,123,425-4,128,459 | - | C2H5g24936 | CX5g038370 | LOC_Os05g08990 | Os05g0182800 | - | Detail |
| C1H5g15058 | 5:4,131,028-4,134,251 | - | C2H5g16852 | CX5g038370 | LOC_Os05g09000 | Os05g0182900 | - | Detail |
| C1H5g08045 | 5:4,139,611-4,140,737 | - | C2H5g21678 | CX5g036910 | LOC_Os05g09020 | Os05g0183100 | OsWRKY67 | Detail |
| C1H5g24536 | 5:4,153,586-4,157,274 | - | C2H5g08140 | CX5g039532 | LOC_Os05g09050 | Os05g0183300 | OsMLO12 | Detail |
| C1H5g06520 | 5:4,157,468-4,158,376 | - | C2H5g18635 | CX5g037375 | - | Os05g0183300 | OsMLO12 | Detail |
| C1H5g06253 | 5:4,186,575-4,188,026 | + | C2H5g23393 | CX5g039725 | LOC_Os05g09150 | Os05g0183900 | - | Detail |
| C1H5g08022 | 5:4,203,737-4,204,213 | + | C2H5g21425 | CX5g039725 | LOC_Os05g09240 | Os05g0184500 | - | Detail |
| C1H5g00334 | 5:4,220,060-4,220,622 | - | C2H5g09509 | - | - | - | - | Detail |
| C1H5g14479 | 5:4,222,831-4,224,267 | - | C2H5g17497 | CX5g040488 | LOC_Os05g09280 | Os05g0184901 | - | Detail |
| C1H5g18334 | 5:4,247,914-4,259,948 | + | C2H5g02956 | CX5g041051 | LOC_Os05g09360 | Os05g0185650 | - | Detail |
| C1H5g09420 | 5:4,265,465-4,269,928 | - | C2H5g29013 | CX5g037169 | LOC_Os05g09370 | - | - | Detail |
| C1H5g18900 | 5:4,271,867-4,273,109 | - | C2H5g25713 | CX5g038482 | - | Os05g0185700 | - | Detail |
| C1H5g05974 | 5:4,274,908-4,278,681 | + | C2H5g18224 | CX5g038289 | LOC_Os05g09380 | Os05g0185800 | - | Detail |
| C1H5g28043 | 5:4,281,504-4,282,215 | - | C2H5g05596 | CX5g040038 | LOC_Os05g09400 | Os05g0186000 | - | Detail |
| C1H5g30722 | 5:4,283,067-4,285,046 | - | C2H5g21372 | CX5g037460 | LOC_Os05g09410 | Os05g0186100 | - | Detail |
| C1H5g29951 | 5:4,296,225-4,299,362 | - | C2H5g01818 | CX5g040773 | LOC_Os05g09440 | Os05g0186300 | OscytME2 | Detail |
| C1H5g15338 | 5:4,326,778-4,327,958 | + | C2H5g14302 | CX5g038771 | LOC_Os05g09480 | Os05g0186900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g054370 | 8:21,366,262-21,369,166 | + | C1H8g05614 | C2H8g15790 | LOC_Os08g38880 | Os08g0497600 | SRWD1, SRWD1, OsWD40-162 | Detail |
| CX8g051176 | 8:21,371,821-21,373,849 | - | C1H8g11509 | C2H8g21269 | LOC_Os08g38890 | Os08g0497900 | - | Detail |
| CX8g054486 | 8:21,377,351-21,378,378 | - | C1H8g04045 | C2H8g28465 | LOC_Os08g38920 | Os08g0498100 | ROMT-15 | Detail |
| CX8g050446 | 8:21,383,536-21,384,748 | - | C1H8g11377 | C2H8g20074 | LOC_Os08g38910 | Os08g0498400 | - | Detail |
| CX8g054028 | 8:21,387,794-21,388,726 | - | C1H8g30587 | C2H8g26195 | LOC_Os08g38920 | Os08g0498600 | - | Detail |
| CX8g051450 | 8:21,397,321-21,398,298 | - | - | C2H8g00191 | LOC_Os08g38960 | Os08g0499000 | - | Detail |
| CX8g053957 | 8:21,410,491-21,413,460 | + | C1H8g08269 | C2H9g12150 | LOC_Os08g38970 | Os08g0499100 | - | Detail |
| CX8g054703 | 8:21,415,674-21,420,665 | + | C1H8g09708 | C2H8g12713 | LOC_Os08g38980 | Os08g0499200 | - | Detail |
| CX8g051331 | 8:21,421,540-21,424,273 | - | C1H8g02579 | C2H8g27487 | LOC_Os08g38990 | Os08g0499300 | - | Detail |
| CX8g053249 | 8:21,433,339-21,434,589 | + | - | C2H8g15198 | - | - | - | Detail |
| CX8g053550 | 8:21,436,022-21,436,702 | + | C1H8g24576 | C2H8g24409 | LOC_Os08g39000 | Os08g0499400 | - | Detail |
| CX8g050489 | 8:21,438,915-21,439,256 | + | - | - | - | - | - | Detail |
| CX8g052028 | 8:21,441,649-21,443,565 | + | C1H8g30363 | - | LOC_Os08g39040 | Os08g0499700 | - | Detail |
| CX8g053491 | 8:21,448,409-21,449,908 | + | C1H8g07305 | C2H8g30618 | LOC_Os08g39050 | Os08g0499800 | - | Detail |
| CX8g054078 | 8:21,453,360-21,455,788 | + | C1H8g19746 | C2H8g09429 | LOC_Os08g39060 | Os08g0499900 | - | Detail |
| CX8g052937 | 8:21,456,492-21,459,491 | - | C1H8g29712 | C2H8g25703 | LOC_Os08g39070 | Os08g0500000 | CSN6 | Detail |
| CX8g052978 | 8:21,460,278-21,468,935 | + | C1H8g23809 | C2H8g28974 | LOC_Os08g39080 | Os08g0500100 | OsPEX5, OsPEX5L, OsPex5pL, DFO2 | Detail |
| CX8g053563 | 8:21,475,792-21,478,551 | - | C1H8g01766 | C2H8g12356 | LOC_Os08g39090 | Os08g0500200 | - | Detail |
| CX8g053778 | 8:21,478,915-21,479,088 | + | - | - | - | - | - | Detail |
| CX8g050896 | 8:21,479,949-21,484,021 | - | C1H8g05400 | C2H8g17818 | LOC_Os08g39100 | Os08g0500300 | - | Detail |