| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13726 | 3:20,390,861-20,393,442 | + | C2H3g25116 | CX3g029359 | - | - | - | Detail |
| C1H3g03200 | 3:20,400,373-20,403,482 | + | C2H3g24537 | CX3g026919 | LOC_Os03g38720 | Os03g0583700 | OsUMP1 | Detail |
| C1H3g23310 | 3:20,409,091-20,411,260 | + | C2H3g24800 | CX3g030948 | LOC_Os03g38730 | Os03g0583800 | - | Detail |
| C1H3g04436 | 3:20,411,565-20,427,058 | - | C2H3g29289 | CX3g030903 | LOC_Os03g38740 | Os03g0583900 | - | Detail |
| C1H3g11527 | 3:20,435,050-20,436,973 | + | C2H3g12332 | CX3g028700 | LOC_Os03g38790 | Os03g0568500 | - | Detail |
| C1H3g11030 | 3:20,448,120-20,448,479 | - | C2H3g19485 | CX3g025305 | - | - | - | Detail |
| C1H3g31357 | 3:20,448,489-20,449,562 | - | C2H3g19485 | CX3g025305 | - | - | - | Detail |
| C1H3g22207 | 3:20,449,725-20,450,414 | - | C2H3g10367 | CX3g025305 | - | - | - | Detail |
| C1H3g12087 | 3:20,508,216-20,514,216 | - | C2H3g17956 | CX3g028633 | LOC_Os03g38930 | Os03g0586300 | - | Detail |
| C1H3g08754 | 3:20,516,713-20,518,665 | + | C2H3g00038 | CX3g026495 | LOC_Os03g38950 | Os03g0586500 | - | Detail |
| C1H3g06874 | 3:20,519,468-20,522,822 | - | C2H3g11125 | CX3g031261 | LOC_Os03g38960 | Os03g0586600 | - | Detail |
| C1H3g18468 | 3:20,526,963-20,539,604 | - | C2H3g25834 | CX3g028836 | LOC_Os03g38970 | Os03g0586700 | PALD | Detail |
| C1H3g11741 | 3:20,544,749-20,553,095 | - | C2H3g21968 | CX3g027203 | LOC_Os03g38980 | Os03g0586800 | - | Detail |
| C1H3g27042 | 3:20,553,245-20,559,759 | + | C2H3g04567 | CX3g026912 | LOC_Os03g38990 | Os03g0586900 | OsPLS2 | Detail |
| C1H3g17183 | 3:20,561,235-20,564,254 | + | C2H3g23894 | CX3g030907 | LOC_Os03g39000 | Os03g0587000 | - | Detail |
| C1H3g08966 | 3:20,564,750-20,566,265 | + | C2H3g20201 | CX3g026983 | LOC_Os03g39010 | Os03g0587100 | - | Detail |
| C1H3g03134 | 3:20,566,619-20,572,424 | - | C2H3g30660 | CX3g025439 | LOC_Os03g39020 | Os03g0587200 | - | Detail |
| C1H3g06709 | 3:20,589,787-20,592,096 | + | C2H3g22828 | CX3g026068 | LOC_Os03g39040 | Os03g0587600 | - | Detail |
| C1H3g00174 | 3:20,602,278-20,607,223 | + | C2H3g01127 | CX3g026068 | LOC_Os03g39129 | Os03g0588200 | - | Detail |
| C1H3g31500 | 3:20,616,598-20,619,354 | + | C2H3g05989 | CX3g026068 | LOC_Os03g39160 | Os03g0588600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g054370 | 8:21,366,262-21,369,166 | + | C1H8g05614 | C2H8g15790 | LOC_Os08g38880 | Os08g0497600 | SRWD1, SRWD1, OsWD40-162 | Detail |
| CX8g051176 | 8:21,371,821-21,373,849 | - | C1H8g11509 | C2H8g21269 | LOC_Os08g38890 | Os08g0497900 | - | Detail |
| CX8g054486 | 8:21,377,351-21,378,378 | - | C1H8g04045 | C2H8g28465 | LOC_Os08g38920 | Os08g0498100 | ROMT-15 | Detail |
| CX8g050446 | 8:21,383,536-21,384,748 | - | C1H8g11377 | C2H8g20074 | LOC_Os08g38910 | Os08g0498400 | - | Detail |
| CX8g054028 | 8:21,387,794-21,388,726 | - | C1H8g30587 | C2H8g26195 | LOC_Os08g38920 | Os08g0498600 | - | Detail |
| CX8g051450 | 8:21,397,321-21,398,298 | - | - | C2H8g00191 | LOC_Os08g38960 | Os08g0499000 | - | Detail |
| CX8g053957 | 8:21,410,491-21,413,460 | + | C1H8g08269 | C2H9g12150 | LOC_Os08g38970 | Os08g0499100 | - | Detail |
| CX8g054703 | 8:21,415,674-21,420,665 | + | C1H8g09708 | C2H8g12713 | LOC_Os08g38980 | Os08g0499200 | - | Detail |
| CX8g051331 | 8:21,421,540-21,424,273 | - | C1H8g02579 | C2H8g27487 | LOC_Os08g38990 | Os08g0499300 | - | Detail |
| CX8g053249 | 8:21,433,339-21,434,589 | + | - | C2H8g15198 | - | - | - | Detail |
| CX8g053550 | 8:21,436,022-21,436,702 | + | C1H8g24576 | C2H8g24409 | LOC_Os08g39000 | Os08g0499400 | - | Detail |
| CX8g050489 | 8:21,438,915-21,439,256 | + | - | - | - | - | - | Detail |
| CX8g052028 | 8:21,441,649-21,443,565 | + | C1H8g30363 | - | LOC_Os08g39040 | Os08g0499700 | - | Detail |
| CX8g053491 | 8:21,448,409-21,449,908 | + | C1H8g07305 | C2H8g30618 | LOC_Os08g39050 | Os08g0499800 | - | Detail |
| CX8g054078 | 8:21,453,360-21,455,788 | + | C1H8g19746 | C2H8g09429 | LOC_Os08g39060 | Os08g0499900 | - | Detail |
| CX8g052937 | 8:21,456,492-21,459,491 | - | C1H8g29712 | C2H8g25703 | LOC_Os08g39070 | Os08g0500000 | CSN6 | Detail |
| CX8g052978 | 8:21,460,278-21,468,935 | + | C1H8g23809 | C2H8g28974 | LOC_Os08g39080 | Os08g0500100 | OsPEX5, OsPEX5L, OsPex5pL, DFO2 | Detail |
| CX8g053563 | 8:21,475,792-21,478,551 | - | C1H8g01766 | C2H8g12356 | LOC_Os08g39090 | Os08g0500200 | - | Detail |
| CX8g053778 | 8:21,478,915-21,479,088 | + | - | - | - | - | - | Detail |
| CX8g050896 | 8:21,479,949-21,484,021 | - | C1H8g05400 | C2H8g17818 | LOC_Os08g39100 | Os08g0500300 | - | Detail |