| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03424 | 6:24,408,283-24,409,997 | - | C1H6g04835 | CX6g042765 | LOC_Os06g46030 | Os06g0672400 | OsG1L2 | Detail |
| C2H6g12858 | 6:24,422,938-24,423,922 | - | - | - | - | - | - | Detail |
| C2H6g07492 | 6:24,427,959-24,428,420 | - | C1H6g06589 | CX6g042065 | - | Os06g0531000 | - | Detail |
| C2H6g20505 | 6:24,434,698-24,435,501 | - | C1H6g00429 | - | LOC_Os06g46120 | Os06g0673300 | - | Detail |
| C2H6g02105 | 6:24,435,643-24,437,220 | + | - | CX6g042455 | - | - | - | Detail |
| C2H6g16269 | 6:24,436,756-24,439,505 | - | C1H6g04560 | CX6g044377 | LOC_Os06g46120 | Os06g0672700 | - | Detail |
| C2H6g04402 | 6:24,445,673-24,446,671 | - | C1H6g09876 | - | LOC_Os06g46065 | Os06g0672801 | - | Detail |
| C2H6g03521 | 6:24,470,199-24,470,987 | - | C1H6g06204 | CX6g042629 | - | Os06g0674000 | - | Detail |
| C2H6g03862 | 6:24,492,016-24,494,187 | - | C1H6g14950 | CX6g044991 | - | Os06g0674000 | - | Detail |
| C2H6g02186 | 6:24,583,163-24,583,878 | + | - | - | - | - | - | Detail |
| C2H6g00947 | 6:24,634,534-24,639,823 | + | C1H6g03179 | CX6g041920 | LOC_Os06g46240 | Os06g0674800 | - | Detail |
| C2H6g16522 | 6:24,662,696-24,666,303 | + | C1H6g03218 | CX6g042717 | LOC_Os06g46270 | Os06g0675600 | OsY37, ONAC011 | Detail |
| C2H6g30405 | 6:24,669,913-24,680,390 | - | C1H6g29534 | CX6g042747 | LOC_Os06g46284 | Os06g0675700 | ONG3 | Detail |
| C2H6g20637 | 6:24,681,360-24,687,204 | - | C1H6g05961 | CX6g043872 | LOC_Os06g46310 | Os06g0676000 | NRAMP3, OsNramp3, OsNRAMP3 | Detail |
| C2H6g24034 | 6:24,708,566-24,710,624 | - | C1H6g12474 | CX6g042075 | LOC_Os06g46330 | Os06g0676600 | - | Detail |
| C2H6g04890 | 6:24,719,088-24,723,422 | + | C1H6g29534 | CX6g041293 | LOC_Os06g46340 | Os06g0676700 | - | Detail |
| C2H6g08388 | 6:24,728,689-24,734,073 | - | C1H6g30642 | CX6g042639 | LOC_Os06g46350 | Os06g0677000 | DEP3, OspPLAIIIδ | Detail |
| C2H6g24564 | 6:24,755,079-24,759,465 | + | C1H6g11720 | CX6g043789 | LOC_Os06g46366 | Os06g0677300 | - | Detail |
| C2H6g27620 | 6:24,760,581-24,763,915 | + | C1H6g31002 | CX6g045150 | LOC_Os06g46372 | Os06g0677400 | - | Detail |
| C2H6g16974 | 6:24,765,283-24,769,704 | + | C1H6g05901 | CX6g042145 | LOC_Os06g46380 | Os06g0677500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000735 | 1:29,086,894-29,087,058 | - | - | - | - | - | - | Detail |
| CX1g002914 | 1:29,090,392-29,096,844 | - | C1H1g19018 | C2H1g05759 | LOC_Os01g56390 | Os01g0770400 | - | Detail |
| CX1g005473 | 1:29,098,637-29,099,113 | + | C1H1g14879 | - | LOC_Os01g56420 | Os01g0770700 | OsCOPT1 | Detail |
| CX1g004170 | 1:29,101,228-29,101,683 | + | C1H1g21445 | - | LOC_Os01g56430 | Os01g0770800 | - | Detail |
| CX1g006911 | 1:29,107,953-29,108,636 | - | C1H1g27537 | C2H1g05454 | LOC_Os01g56450 | Os01g0771000 | - | Detail |
| CX1g002609 | 1:29,120,096-29,122,052 | - | C1H1g10943 | C2H1g02164 | LOC_Os01g56460 | Os01g0771100 | - | Detail |
| CX1g002494 | 1:29,124,816-29,126,336 | + | C1H1g21728 | C2H1g21925 | LOC_Os01g56470 | Os01g0771200 | XB24 | Detail |
| CX1g002023 | 1:29,132,920-29,149,102 | - | C1H1g23479 | C2H1g08277 | LOC_Os01g56490 | Os01g0771400 | - | Detail |
| CX1g002513 | 1:29,151,013-29,151,309 | - | - | - | - | - | - | Detail |
| CX1g003064 | 1:29,159,338-29,163,171 | - | C1H1g09719 | C2H1g09013 | LOC_Os01g56510 | Os01g0771900 | - | Detail |
| CX1g004890 | 1:29,165,369-29,170,057 | - | C1H1g15587 | C2H1g10326 | LOC_Os01g56520 | Os01g0772000 | OsDRB6 | Detail |
| CX1g004076 | 1:29,172,467-29,173,388 | - | C1H1g16550 | C2H1g20436 | LOC_Os01g56530 | Os01g0772100 | - | Detail |
| CX1g002201 | 1:29,174,425-29,176,750 | - | C1H1g10415 | C2H1g23179 | LOC_Os01g56540 | Os01g0772150 | - | Detail |
| CX1g006273 | 1:29,177,885-29,181,174 | - | C1H1g16286 | C2H1g01361 | LOC_Os01g56550 | Os01g0772200 | - | Detail |
| CX1g001770 | 1:29,187,602-29,190,095 | + | C1H1g24646 | C2H1g16043 | LOC_Os01g56560 | Os01g0772400 | - | Detail |
| CX1g000006 | 1:29,190,750-29,192,184 | - | C1H1g22554 | C2H1g11972 | LOC_Os01g56570 | Os01g0772500 | - | Detail |
| CX1g003746 | 1:29,198,689-29,205,108 | + | C1H1g31413 | C2H1g14754 | LOC_Os01g56580 | Os01g0772600 | - | Detail |
| CX1g007111 | 1:29,207,086-29,229,774 | + | C1H1g02674 | C2H1g21696 | LOC_Os01g56590 | Os01g0772700 | - | Detail |
| CX1g000007 | 1:29,234,848-29,238,352 | + | C1H1g01600 | C2H1g02753 | LOC_Os01g56600 | Os01g0772800 | - | Detail |
| CX1g003614 | 1:29,238,955-29,239,990 | - | C1H1g07828 | C2H1g15956 | LOC_Os01g56610 | Os01g0772900 | - | Detail |