| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g25012 | 3:11,363,444-11,365,260 | - | C1H3g19465 | CX3g031034 | LOC_Os03g22270 | Os03g0342900 | - | Detail |
| C2H3g07847 | 3:11,371,881-11,376,882 | + | C1H3g19573 | CX3g027432 | LOC_Os03g22320 | Os03g0343300 | - | Detail |
| C2H3g27542 | 3:11,378,434-11,382,128 | + | C1H3g04598 | CX3g030144 | LOC_Os03g22330 | Os03g0343400 | - | Detail |
| C2H3g22833 | 3:11,383,871-11,385,472 | - | C1H3g18164 | CX3g027840 | LOC_Os03g22340 | Os03g0343500 | - | Detail |
| C2H3g27042 | 3:11,389,626-11,392,034 | + | C1H3g07503 | CX3g028939 | LOC_Os03g22350 | Os03g0343700 | - | Detail |
| C2H3g07184 | 3:11,401,989-11,406,699 | + | C1H3g24513 | CX3g027723 | LOC_Os03g22380 | Os03g0344100 | OsSR32 | Detail |
| C2H3g20782 | 3:11,410,545-11,412,615 | - | C1H3g14886 | CX3g030547 | LOC_Os03g22390 | Os03g0305400 | OsUSP3 | Detail |
| C2H3g20681 | 3:11,414,281-11,419,375 | - | C1H3g05435 | CX3g030391 | LOC_Os03g22400 | Os03g0344300 | OsFUG1, OsFUG1.3 | Detail |
| C2H3g04996 | 3:11,428,070-11,438,987 | - | C1H3g07428 | CX3g028417 | LOC_Os03g22420 | Os03g0344700 | - | Detail |
| C2H3g03468 | 3:11,444,495-11,448,954 | - | C1H3g00349 | CX3g028111 | LOC_Os03g22430 | Os03g0344900 | - | Detail |
| C2H3g18234 | 3:11,454,918-11,459,144 | - | C1H3g20152 | CX3g028584 | LOC_Os03g22450 | Os03g0345100 | OsRad9, OsRad9.2 | Detail |
| C2H3g01674 | 3:11,459,289-11,460,721 | + | C1H3g20510 | CX3g029736 | LOC_Os03g22460 | Os03g0345200 | - | Detail |
| C2H3g02585 | 3:11,462,484-11,464,298 | - | C1H3g29872 | CX3g029517 | LOC_Os03g22470 | Os03g0345300 | - | Detail |
| C2H3g21914 | 3:11,481,807-11,483,706 | - | C1H3g23882 | CX3g027384 | LOC_Os03g22490 | Os03g0345700 | - | Detail |
| C2H3g16014 | 3:11,520,023-11,520,352 | - | C1H3g04062 | CX3g030360 | LOC_Os03g22510 | Os03g0346200 | ACE1, OsSIN | Detail |
| C2H3g21311 | 3:11,537,918-11,544,352 | + | C1H3g13519 | CX3g029712 | LOC_Os03g22540 | Os03g0346700 | - | Detail |
| C2H3g14665 | 3:11,546,502-11,551,840 | + | C1H3g09102 | CX3g029457 | LOC_Os03g22550 | Os03g0346800 | - | Detail |
| C2H3g24882 | 3:11,555,281-11,560,901 | - | C1H3g03973 | CX3g027020 | LOC_Os03g22560 | Os03g0346900 | - | Detail |
| C2H3g28349 | 3:11,571,302-11,582,977 | + | C1H3g06261 | CX3g030324 | LOC_Os03g22570 | Os03g0347200 | - | Detail |
| C2H3g09980 | 3:11,585,339-11,596,872 | - | C1H3g24032 | CX3g026560 | LOC_Os03g22580 | Os03g0347300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053214 | 8:20,753,886-20,754,770 | + | C1H8g09056 | C2H8g13904 | LOC_Os08g37760 | Os08g0484200 | - | Detail |
| CX8g053305 | 8:20,756,335-20,756,505 | + | - | - | - | Os08g0484300 | - | Detail |
| CX8g052694 | 8:20,760,438-20,767,440 | - | C1H8g11144 | C2H8g07782 | LOC_Os08g37780 | Os08g0484400 | - | Detail |
| CX8g050930 | 8:20,768,412-20,771,624 | - | C1H8g28521 | C2H8g28642 | LOC_Os08g37790 | Os08g0484500 | - | Detail |
| CX8g051810 | 8:20,772,985-20,773,134 | - | - | - | - | - | - | Detail |
| CX8g054447 | 8:20,774,422-20,774,679 | - | - | C2H8g02027 | - | - | - | Detail |
| CX8g053838 | 8:20,775,609-20,779,077 | + | C1H8g08760 | C2H8g04029 | LOC_Os08g37800 | Os08g0484600 | OSK4, osk4, OsATG1c, ATG1C, SnRK1B, snrk1b, SnRK1B/OSK24, OSK24, OsK4 | Detail |
| CX8g051319 | 8:20,784,795-20,784,974 | + | - | - | - | - | - | Detail |
| CX8g054252 | 8:20,786,533-20,790,097 | + | C1H8g07271 | C2H8g21066 | LOC_Os08g37820 | Os08g0484800 | - | Detail |
| CX8g053978 | 8:20,792,968-20,793,219 | - | - | - | - | - | - | Detail |
| CX8g052720 | 8:20,799,439-20,800,437 | + | - | - | - | - | - | Detail |
| CX8g054237 | 8:20,809,553-20,816,477 | + | C1H8g08354 | C2H8g11309 | LOC_Os08g37874 | Os08g0485400 | - | Detail |
| CX8g050461 | 8:20,820,404-20,820,885 | + | C1H8g24443 | C2H8g09800 | LOC_Os08g37890 | Os08g0485500 | RAE2, OsEPFL1, EPFL1, GAD1 | Detail |
| CX8g054267 | 8:20,823,647-20,828,628 | + | C1H8g08175 | C2H8g22834 | LOC_Os08g37904 | Os08g0485600 | - | Detail |
| CX8g053049 | 8:20,844,305-20,849,365 | + | C1H8g13898 | C2H8g11998 | LOC_Os08g37920 | Os08g0485700 | - | Detail |
| CX8g053483 | 8:20,851,189-20,853,436 | - | C1H8g11808 | C2H8g20917 | LOC_Os08g37930 | Os08g0485800 | - | Detail |
| CX8g052013 | 8:20,854,932-20,857,986 | - | C1H8g21083 | C2H8g01955 | LOC_Os08g37940 | Os08g0485900 | - | Detail |
| CX8g054609 | 8:20,859,965-20,867,561 | + | C1H8g12876 | C2H8g06885 | LOC_Os08g37950 | Os08g0486100 | - | Detail |
| CX8g050748 | 8:20,868,505-20,872,081 | - | C1H8g09919 | C2H8g17660 | LOC_Os08g37960 | Os08g0486200 | - | Detail |
| CX8g052173 | 8:20,880,567-20,882,121 | - | C1H8g05150 | C2H8g28570 | LOC_Os08g37970 | Os08g0486300 | Os2R_MYB80 | Detail |