| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g18573 | 5:24,642,573-24,646,550 | - | C1H5g06374 | CX5g037718 | LOC_Os05g51190 | Os05g0589700 | - | Detail |
| C2H5g15682 | 5:24,653,985-24,655,433 | - | C1H5g25711 | CX5g040079 | LOC_Os05g51220 | Os05g0590000 | - | Detail |
| C2H5g27742 | 5:24,656,416-24,658,252 | + | C1H5g15774 | CX5g040435 | LOC_Os05g51230 | Os05g0590100 | - | Detail |
| C2H5g27114 | 5:24,660,356-24,662,176 | - | C1H5g25595 | CX5g040181 | LOC_Os05g51240 | Os05g0590300 | D14L2a | Detail |
| C2H5g10959 | 5:24,669,243-24,670,635 | + | C1H5g16193 | CX5g039719 | LOC_Os05g51360 | Os05g0591400 | OsEBS | Detail |
| C2H5g16340 | 5:24,678,406-24,682,258 | + | C1H5g00184 | CX5g037625 | LOC_Os05g51390 | Os05g0591600 | LOGL8 | Detail |
| C2H5g03812 | 5:24,687,255-24,692,176 | + | C1H5g07610 | CX5g037154 | LOC_Os05g51400 | Os05g0591800 | - | Detail |
| C2H5g08893 | 5:24,693,725-24,698,056 | - | C1H5g17721 | CX5g037640 | LOC_Os05g51420 | Os08g0398400 | OsHIR1, OsHSI1 | Detail |
| C2H5g12015 | 5:24,701,036-24,702,133 | + | C1H5g09746 | - | LOC_Os05g51440 | Os05g0592000 | - | Detail |
| C2H5g20454 | 5:24,702,367-24,705,799 | - | C1H5g13463 | CX5g037130 | LOC_Os05g51450 | Os05g0592100 | AL3, OsClpR1 | Detail |
| C2H5g22532 | 5:24,711,320-24,713,458 | + | C1H5g18064 | CX5g037674 | LOC_Os05g51470 | Os05g0592300 | - | Detail |
| C2H5g07753 | 5:24,715,854-24,716,153 | - | C1H5g29997 | - | LOC_Os04g46270 | - | - | Detail |
| C2H5g11116 | 5:24,716,307-24,716,751 | - | C1H5g01451 | CX5g040049 | - | Os04g0547800 | - | Detail |
| C2H5g07712 | 5:24,717,185-24,732,694 | + | C1H5g21435 | CX5g040707 | LOC_Os05g51480 | Os05g0592400 | - | Detail |
| C2H5g25797 | 5:24,734,820-24,740,734 | - | C1H5g00098 | CX5g041136 | LOC_Os05g51500 | Os05g0592600 | - | Detail |
| C2H5g18379 | 5:24,742,550-24,745,294 | - | C1H5g06239 | CX5g038095 | LOC_Os05g51510 | Os05g0592800 | - | Detail |
| C2H5g13073 | 5:24,749,220-24,755,513 | - | C1H5g06040 | CX5g040640 | LOC_Os05g51520 | Os05g0593100 | - | Detail |
| C2H5g03858 | 5:24,755,854-24,758,005 | - | C1H5g29585 | CX5g039758 | LOC_Os05g51540 | Os05g0593200 | - | Detail |
| C2H5g22607 | 5:24,758,028-24,770,771 | - | C1H5g12721 | CX5g036829 | LOC_Os05g51550 | Os05g0593550 | - | Detail |
| C2H5g18281 | 5:24,772,134-24,772,583 | - | C1H5g11475 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053214 | 8:20,753,886-20,754,770 | + | C1H8g09056 | C2H8g13904 | LOC_Os08g37760 | Os08g0484200 | - | Detail |
| CX8g053305 | 8:20,756,335-20,756,505 | + | - | - | - | Os08g0484300 | - | Detail |
| CX8g052694 | 8:20,760,438-20,767,440 | - | C1H8g11144 | C2H8g07782 | LOC_Os08g37780 | Os08g0484400 | - | Detail |
| CX8g050930 | 8:20,768,412-20,771,624 | - | C1H8g28521 | C2H8g28642 | LOC_Os08g37790 | Os08g0484500 | - | Detail |
| CX8g051810 | 8:20,772,985-20,773,134 | - | - | - | - | - | - | Detail |
| CX8g054447 | 8:20,774,422-20,774,679 | - | - | C2H8g02027 | - | - | - | Detail |
| CX8g053838 | 8:20,775,609-20,779,077 | + | C1H8g08760 | C2H8g04029 | LOC_Os08g37800 | Os08g0484600 | OSK4, osk4, OsATG1c, ATG1C, SnRK1B, snrk1b, SnRK1B/OSK24, OSK24, OsK4 | Detail |
| CX8g051319 | 8:20,784,795-20,784,974 | + | - | - | - | - | - | Detail |
| CX8g054252 | 8:20,786,533-20,790,097 | + | C1H8g07271 | C2H8g21066 | LOC_Os08g37820 | Os08g0484800 | - | Detail |
| CX8g053978 | 8:20,792,968-20,793,219 | - | - | - | - | - | - | Detail |
| CX8g052720 | 8:20,799,439-20,800,437 | + | - | - | - | - | - | Detail |
| CX8g054237 | 8:20,809,553-20,816,477 | + | C1H8g08354 | C2H8g11309 | LOC_Os08g37874 | Os08g0485400 | - | Detail |
| CX8g050461 | 8:20,820,404-20,820,885 | + | C1H8g24443 | C2H8g09800 | LOC_Os08g37890 | Os08g0485500 | RAE2, OsEPFL1, EPFL1, GAD1 | Detail |
| CX8g054267 | 8:20,823,647-20,828,628 | + | C1H8g08175 | C2H8g22834 | LOC_Os08g37904 | Os08g0485600 | - | Detail |
| CX8g053049 | 8:20,844,305-20,849,365 | + | C1H8g13898 | C2H8g11998 | LOC_Os08g37920 | Os08g0485700 | - | Detail |
| CX8g053483 | 8:20,851,189-20,853,436 | - | C1H8g11808 | C2H8g20917 | LOC_Os08g37930 | Os08g0485800 | - | Detail |
| CX8g052013 | 8:20,854,932-20,857,986 | - | C1H8g21083 | C2H8g01955 | LOC_Os08g37940 | Os08g0485900 | - | Detail |
| CX8g054609 | 8:20,859,965-20,867,561 | + | C1H8g12876 | C2H8g06885 | LOC_Os08g37950 | Os08g0486100 | - | Detail |
| CX8g050748 | 8:20,868,505-20,872,081 | - | C1H8g09919 | C2H8g17660 | LOC_Os08g37960 | Os08g0486200 | - | Detail |
| CX8g052173 | 8:20,880,567-20,882,121 | - | C1H8g05150 | C2H8g28570 | LOC_Os08g37970 | Os08g0486300 | Os2R_MYB80 | Detail |