| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g05903 | 4:4,789,837-4,791,024 | - | C2H4g26263 | CX4g035800 | LOC_Os04g11450 | Os04g0191800 | - | Detail |
| C1H4g05621 | 4:4,822,123-4,829,843 | - | C2H4g25761 | CX4g033552 | LOC_Os04g11640 | Os04g0192775 | - | Detail |
| C1H4g31574 | 4:4,845,148-4,847,652 | + | C2H4g11285 | CX4g034453 | LOC_Os04g11640 | Os04g0193200 | - | Detail |
| C1H4g01782 | 4:4,881,187-4,884,405 | + | C2H4g23687 | CX4g036003 | LOC_Os04g11640 | Os04g0193200 | - | Detail |
| C1H4g23201 | 4:4,888,464-4,889,690 | - | C2H4g26263 | CX4g033050 | LOC_Os04g11660 | Os04g0193300 | - | Detail |
| C1H4g26698 | 4:4,954,897-4,956,627 | - | C2H4g30587 | CX4g035925 | - | - | - | Detail |
| C1H4g03662 | 4:4,973,470-4,976,703 | - | C2H4g17137 | CX4g036339 | LOC_Os05g39490 | Os02g0517900 | - | Detail |
| C1H4g31519 | 4:5,082,569-5,083,072 | + | - | - | - | - | - | Detail |
| C1H4g02299 | 4:5,093,393-5,093,879 | - | C2H4g10370 | CX4g033253 | - | - | - | Detail |
| C1H4g23666 | 4:5,100,751-5,103,996 | - | C2H4g26263 | CX4g033050 | LOC_Os04g11660 | Os04g0193300 | - | Detail |
| C1H4g27268 | 4:5,183,107-5,186,950 | + | C2H4g08740 | CX4g033727 | LOC_Os04g11760 | Os04g0193950 | - | Detail |
| C1H4g00127 | 4:5,209,481-5,215,282 | + | C2H4g24115 | CX4g034119 | - | - | - | Detail |
| C1H4g24522 | 4:5,229,208-5,229,450 | + | - | CX4g033339 | LOC_Os04g11800 | Os04g0194400 | - | Detail |
| C1H4g31455 | 4:5,230,588-5,231,922 | + | C2H4g13106 | CX4g035376 | LOC_Os04g11810 | Os04g0194466 | - | Detail |
| C1H4g11202 | 4:5,233,491-5,240,063 | - | C2H4g01433 | CX4g032821 | LOC_Os04g11820 | Os04g0194500 | - | Detail |
| C1H4g29840 | 4:5,253,729-5,254,277 | - | C2H4g17202 | CX4g033978 | LOC_Os04g11830 | Os04g0194600 | - | Detail |
| C1H4g19431 | 4:5,260,255-5,267,700 | + | C2H4g23993 | CX4g034386 | LOC_Os04g11880 | Os04g0195000 | - | Detail |
| C1H4g23499 | 4:5,272,718-5,273,866 | - | C2H4g26263 | CX4g032660 | LOC_Os04g11890 | Os04g0195100 | - | Detail |
| C1H4g25694 | 4:5,280,260-5,283,553 | + | C2H4g11331 | CX4g031626 | LOC_Os04g11910 | - | - | Detail |
| C1H4g25475 | 4:5,285,880-5,286,483 | + | C2H4g08911 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053214 | 8:20,753,886-20,754,770 | + | C1H8g09056 | C2H8g13904 | LOC_Os08g37760 | Os08g0484200 | - | Detail |
| CX8g053305 | 8:20,756,335-20,756,505 | + | - | - | - | Os08g0484300 | - | Detail |
| CX8g052694 | 8:20,760,438-20,767,440 | - | C1H8g11144 | C2H8g07782 | LOC_Os08g37780 | Os08g0484400 | - | Detail |
| CX8g050930 | 8:20,768,412-20,771,624 | - | C1H8g28521 | C2H8g28642 | LOC_Os08g37790 | Os08g0484500 | - | Detail |
| CX8g051810 | 8:20,772,985-20,773,134 | - | - | - | - | - | - | Detail |
| CX8g054447 | 8:20,774,422-20,774,679 | - | - | C2H8g02027 | - | - | - | Detail |
| CX8g053838 | 8:20,775,609-20,779,077 | + | C1H8g08760 | C2H8g04029 | LOC_Os08g37800 | Os08g0484600 | OSK4, osk4, OsATG1c, ATG1C, SnRK1B, snrk1b, SnRK1B/OSK24, OSK24, OsK4 | Detail |
| CX8g051319 | 8:20,784,795-20,784,974 | + | - | - | - | - | - | Detail |
| CX8g054252 | 8:20,786,533-20,790,097 | + | C1H8g07271 | C2H8g21066 | LOC_Os08g37820 | Os08g0484800 | - | Detail |
| CX8g053978 | 8:20,792,968-20,793,219 | - | - | - | - | - | - | Detail |
| CX8g052720 | 8:20,799,439-20,800,437 | + | - | - | - | - | - | Detail |
| CX8g054237 | 8:20,809,553-20,816,477 | + | C1H8g08354 | C2H8g11309 | LOC_Os08g37874 | Os08g0485400 | - | Detail |
| CX8g050461 | 8:20,820,404-20,820,885 | + | C1H8g24443 | C2H8g09800 | LOC_Os08g37890 | Os08g0485500 | RAE2, OsEPFL1, EPFL1, GAD1 | Detail |
| CX8g054267 | 8:20,823,647-20,828,628 | + | C1H8g08175 | C2H8g22834 | LOC_Os08g37904 | Os08g0485600 | - | Detail |
| CX8g053049 | 8:20,844,305-20,849,365 | + | C1H8g13898 | C2H8g11998 | LOC_Os08g37920 | Os08g0485700 | - | Detail |
| CX8g053483 | 8:20,851,189-20,853,436 | - | C1H8g11808 | C2H8g20917 | LOC_Os08g37930 | Os08g0485800 | - | Detail |
| CX8g052013 | 8:20,854,932-20,857,986 | - | C1H8g21083 | C2H8g01955 | LOC_Os08g37940 | Os08g0485900 | - | Detail |
| CX8g054609 | 8:20,859,965-20,867,561 | + | C1H8g12876 | C2H8g06885 | LOC_Os08g37950 | Os08g0486100 | - | Detail |
| CX8g050748 | 8:20,868,505-20,872,081 | - | C1H8g09919 | C2H8g17660 | LOC_Os08g37960 | Os08g0486200 | - | Detail |
| CX8g052173 | 8:20,880,567-20,882,121 | - | C1H8g05150 | C2H8g28570 | LOC_Os08g37970 | Os08g0486300 | Os2R_MYB80 | Detail |