| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g08216 | 9:9,439,248-9,439,987 | - | C2H9g30412 | CX9g057843 | LOC_Os09g18360 | Os09g0353200 | - | Detail |
| C1H9g09295 | 9:9,440,836-9,441,919 | - | C2H9g30412 | CX9g057843 | LOC_Os09g18360 | Os09g0353200 | - | Detail |
| C1H9g04955 | 9:9,454,547-9,456,631 | + | C2H9g08214 | CX9g055425 | LOC_Os09g18390 | Os09g0353400 | - | Detail |
| C1H9g29305 | 9:9,467,542-9,467,763 | + | C2H9g27520 | CX9g055425 | LOC_Os09g18520 | Os09g0354300 | - | Detail |
| C1H9g07758 | 9:9,475,327-9,476,052 | + | C2H9g11760 | CX9g055968 | LOC_Os09g18450 | Os09g0353700 | - | Detail |
| C1H9g19178 | 9:9,479,448-9,481,196 | + | C2H9g08714 | CX9g055968 | LOC_Os09g18450 | Os09g0354100 | - | Detail |
| C1H9g30762 | 9:9,486,955-9,488,698 | - | C2H9g08214 | CX9g055425 | LOC_Os09g18520 | Os09g0354300 | - | Detail |
| C1H9g24256 | 9:9,498,867-9,501,779 | - | C2H9g09770 | CX9g056896 | LOC_Os09g18530 | Os09g0355400 | - | Detail |
| C1H9g24532 | 9:9,502,391-9,502,837 | - | C2H9g15417 | CX9g055165 | LOC_Os09g18540 | Os09g0349600 | - | Detail |
| C1H9g06855 | 9:9,508,255-9,509,735 | - | C2H9g16060 | CX9g055165 | LOC_Os09g18620 | Os09g0356200 | - | Detail |
| C1H9g22899 | 9:9,551,698-9,554,089 | + | C2H9g15103 | CX9g057944 | LOC_Os09g19400 | Os09g0358700 | OsCBM1, OsMRLP15 | Detail |
| C1H9g12366 | 9:9,556,269-9,558,506 | + | C2H9g27713 | CX9g057944 | LOC_Os09g19350 | Os09g0358000 | - | Detail |
| C1H9g27368 | 9:9,564,634-9,574,634 | + | C2H9g01105 | CX3g029985 | - | - | - | Detail |
| C1H9g19813 | 9:9,574,717-9,576,498 | + | C2H9g01105 | - | - | - | - | Detail |
| C1H9g15807 | 9:9,606,819-9,610,207 | + | C2H9g12232 | CX9g055760 | LOC_Os09g18594 | Os09g0356200 | - | Detail |
| C1H9g10170 | 9:9,636,050-9,644,685 | + | C2H9g04161 | CX9g057284 | LOC_Os09g18594 | Os09g0356200 | - | Detail |
| C1H9g09829 | 9:9,636,581-9,645,430 | - | - | - | - | - | - | Detail |
| C1H9g21628 | 9:9,654,581-9,660,202 | + | C2H9g24070 | CX9g057284 | LOC_Os09g18594 | Os09g0355400 | - | Detail |
| C1H9g09637 | 9:9,672,320-9,675,940 | - | C2H9g00341 | CX9g057245 | LOC_Os09g19280 | Os09g0357400 | - | Detail |
| C1H9g20757 | 9:9,694,729-9,696,882 | - | C2H9g00341 | CX9g057245 | LOC_Os09g19330 | Os09g0357400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053214 | 8:20,753,886-20,754,770 | + | C1H8g09056 | C2H8g13904 | LOC_Os08g37760 | Os08g0484200 | - | Detail |
| CX8g053305 | 8:20,756,335-20,756,505 | + | - | - | - | Os08g0484300 | - | Detail |
| CX8g052694 | 8:20,760,438-20,767,440 | - | C1H8g11144 | C2H8g07782 | LOC_Os08g37780 | Os08g0484400 | - | Detail |
| CX8g050930 | 8:20,768,412-20,771,624 | - | C1H8g28521 | C2H8g28642 | LOC_Os08g37790 | Os08g0484500 | - | Detail |
| CX8g051810 | 8:20,772,985-20,773,134 | - | - | - | - | - | - | Detail |
| CX8g054447 | 8:20,774,422-20,774,679 | - | - | C2H8g02027 | - | - | - | Detail |
| CX8g053838 | 8:20,775,609-20,779,077 | + | C1H8g08760 | C2H8g04029 | LOC_Os08g37800 | Os08g0484600 | OSK4, osk4, OsATG1c, ATG1C, SnRK1B, snrk1b, SnRK1B/OSK24, OSK24, OsK4 | Detail |
| CX8g051319 | 8:20,784,795-20,784,974 | + | - | - | - | - | - | Detail |
| CX8g054252 | 8:20,786,533-20,790,097 | + | C1H8g07271 | C2H8g21066 | LOC_Os08g37820 | Os08g0484800 | - | Detail |
| CX8g053978 | 8:20,792,968-20,793,219 | - | - | - | - | - | - | Detail |
| CX8g052720 | 8:20,799,439-20,800,437 | + | - | - | - | - | - | Detail |
| CX8g054237 | 8:20,809,553-20,816,477 | + | C1H8g08354 | C2H8g11309 | LOC_Os08g37874 | Os08g0485400 | - | Detail |
| CX8g050461 | 8:20,820,404-20,820,885 | + | C1H8g24443 | C2H8g09800 | LOC_Os08g37890 | Os08g0485500 | RAE2, OsEPFL1, EPFL1, GAD1 | Detail |
| CX8g054267 | 8:20,823,647-20,828,628 | + | C1H8g08175 | C2H8g22834 | LOC_Os08g37904 | Os08g0485600 | - | Detail |
| CX8g053049 | 8:20,844,305-20,849,365 | + | C1H8g13898 | C2H8g11998 | LOC_Os08g37920 | Os08g0485700 | - | Detail |
| CX8g053483 | 8:20,851,189-20,853,436 | - | C1H8g11808 | C2H8g20917 | LOC_Os08g37930 | Os08g0485800 | - | Detail |
| CX8g052013 | 8:20,854,932-20,857,986 | - | C1H8g21083 | C2H8g01955 | LOC_Os08g37940 | Os08g0485900 | - | Detail |
| CX8g054609 | 8:20,859,965-20,867,561 | + | C1H8g12876 | C2H8g06885 | LOC_Os08g37950 | Os08g0486100 | - | Detail |
| CX8g050748 | 8:20,868,505-20,872,081 | - | C1H8g09919 | C2H8g17660 | LOC_Os08g37960 | Os08g0486200 | - | Detail |
| CX8g052173 | 8:20,880,567-20,882,121 | - | C1H8g05150 | C2H8g28570 | LOC_Os08g37970 | Os08g0486300 | Os2R_MYB80 | Detail |