| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g31060 | 4:9,981,427-9,988,469 | - | C2H4g17225 | CX4g031399 | LOC_Os04g21660 | Os04g0284600 | - | Detail |
| C1H4g08612 | 4:9,994,952-9,997,366 | - | C2H4g05089 | CX4g036320 | LOC_Os04g21710 | Os04g0284900 | - | Detail |
| C1H4g20758 | 4:10,003,717-10,006,045 | - | C2H4g20581 | - | - | - | - | Detail |
| C1H4g13734 | 4:10,010,659-10,011,154 | - | C2H4g20979 | CX4g036368 | - | - | - | Detail |
| C1H4g07976 | 4:10,085,788-10,087,495 | + | C2H4g21060 | CX4g033406 | LOC_Os04g21790 | Os04g0286300 | - | Detail |
| C1H4g11497 | 4:10,104,559-10,109,249 | + | C2H4g29131 | CX4g034311 | LOC_Os04g21790 | Os04g0286300 | - | Detail |
| C1H4g12762 | 4:10,117,168-10,118,090 | + | - | CX4g031808 | - | Os04g0286366 | - | Detail |
| C1H4g30101 | 4:10,125,468-10,128,266 | + | C2H4g08504 | CX4g035225 | LOC_Os04g21890 | Os04g0286900 | - | Detail |
| C1H4g26329 | 4:10,149,454-10,150,595 | + | C2H4g22174 | CX4g034268 | LOC_Os04g21950 | Os04g0287400 | WRKY51, OsWRKY51 | Detail |
| C1H4g05917 | 4:10,195,606-10,196,473 | - | C2H4g16248 | CX4g033258 | LOC_Os04g22080 | Os04g0288100 | - | Detail |
| C1H4g15397 | 4:10,376,448-10,380,092 | - | C2H4g26122 | CX4g034987 | - | Os04g0295500 | - | Detail |
| C1H4g06691 | 4:10,404,858-10,405,596 | + | - | - | - | - | - | Detail |
| C1H4g19803 | 4:10,407,432-10,409,019 | + | C2H4g30305 | CX4g033464 | - | Os04g0615900 | - | Detail |
| C1H4g01835 | 4:10,431,424-10,432,366 | - | C2H7g18198 | - | - | - | - | Detail |
| C1H4g02573 | 4:10,436,420-10,436,816 | - | C2H7g24974 | CX7g048152 | - | - | - | Detail |
| C1H4g27160 | 4:10,438,101-10,439,303 | - | C2H4g23043 | CX4g032513 | LOC_Os04g22120 | Os04g0288500 | - | Detail |
| C1H4g28277 | 4:10,442,054-10,443,538 | - | C2H4g29101 | CX4g032513 | LOC_Os04g22120 | Os04g0288500 | - | Detail |
| C1H4g23795 | 4:10,485,650-10,490,541 | + | C2H4g20140 | CX4g034060 | LOC_Os04g22240 | Os04g0289800 | - | Detail |
| C1H4g25540 | 4:10,536,375-10,542,259 | + | C2H4g28831 | CX4g032411 | LOC_Os04g22360 | Os04g0290800 | OsRUS1 | Detail |
| C1H4g12809 | 4:10,552,015-10,558,725 | + | C2H4g30508 | CX4g035342 | LOC_Os04g22380 | Os04g0291100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g051406 | 8:20,117,817-20,119,844 | - | C1H8g16537 | C2H8g09212 | LOC_Os08g36630 | Os08g0470200 | - | Detail |
| CX8g050498 | 8:20,132,938-20,135,215 | - | C1H8g15884 | C2H8g00759 | LOC_Os08g36680 | Os08g0470700 | - | Detail |
| CX8g051686 | 8:20,141,306-20,142,722 | - | C1H8g17675 | C2H8g29673 | LOC_Os08g36700 | Os08g0471000 | - | Detail |
| CX8g050820 | 8:20,149,837-20,150,259 | + | - | - | - | Os08g0471300 | - | Detail |
| CX8g052000 | 8:20,159,815-20,160,564 | - | C1H8g05470 | C2H8g27170 | LOC_Os08g36740 | Os08g0536800 | OsBCL1, OsbHLH080 | Detail |
| CX8g053494 | 8:20,167,741-20,167,896 | - | - | - | - | - | - | Detail |
| CX8g051457 | 8:20,171,714-20,171,932 | + | C1H9g14260 | - | LOC_Os08g36750 | Os09g0455400 | - | Detail |
| CX8g053925 | 8:20,177,001-20,180,577 | + | C1H8g06196 | C2H8g28100 | LOC_Os08g36760 | Os08g0471800 | - | Detail |
| CX8g054683 | 8:20,178,397-20,178,813 | - | - | - | - | Os08g0471850 | - | Detail |
| CX8g052137 | 8:20,182,493-20,188,960 | - | C1H8g29741 | C2H8g15665 | LOC_Os08g36774 | Os08g0471900 | - | Detail |
| CX8g052895 | 8:20,189,934-20,197,887 | + | C1H8g27637 | C2H8g18540 | LOC_Os08g36790 | Os08g0472000 | TRAB1, OsbZIP66, OsABF5, Osbzip66 | Detail |
| CX8g051671 | 8:20,203,210-20,203,359 | + | - | - | - | - | - | Detail |
| CX8g054580 | 8:20,212,110-20,213,306 | - | C1H9g14428 | C2H8g02869 | LOC_Os08g36820 | Os08g0472400 | - | Detail |
| CX8g052579 | 8:20,231,291-20,239,044 | + | C1H8g28655 | C2H8g05191 | LOC_Os08g36840 | Os08g0472600 | OsFUT11, FucTA, FucT | Detail |
| CX8g051027 | 8:20,246,655-20,251,588 | - | C1H8g14881 | C2H8g23458 | LOC_Os08g36860 | Os08g0472800 | CYP707A6, OsABA8ox2 | Detail |
| CX8g053791 | 8:20,274,476-20,274,712 | + | - | - | - | - | - | Detail |
| CX8g053569 | 8:20,280,744-20,282,280 | + | C1H8g15018 | C2H8g21663 | LOC_Os08g36900 | Os08g0473600 | - | Detail |
| CX8g054291 | 8:20,286,624-20,288,458 | + | C1H8g15923 | C2H8g00245 | LOC_Os08g36910 | Os08g0473900 | - | Detail |
| CX8g050860 | 8:20,289,092-20,289,250 | + | - | - | - | Os04g0385650 | - | Detail |
| CX8g051022 | 8:20,304,892-20,305,110 | - | - | - | - | - | - | Detail |