| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g06764 | 2:4,415,986-4,419,645 | + | C2H2g11577 | CX2g024862 | LOC_Os02g09620 | Os02g0189300 | - | Detail |
| C1H2g26037 | 2:4,420,482-4,421,505 | - | C2H2g10166 | CX2g024704 | LOC_Os02g09630 | Os02g0189400 | - | Detail |
| C1H2g12021 | 2:4,430,237-4,430,836 | - | C2H2g02446 | CX2g020740 | LOC_Os02g09650 | Os02g0797100 | - | Detail |
| C1H2g06273 | 2:4,437,020-4,444,070 | + | C2H2g24841 | - | - | - | - | Detail |
| C1H2g06467 | 2:4,438,145-4,440,467 | - | C2H2g02506 | CX2g022600 | LOC_Os02g09720 | Os02g0189800 | - | Detail |
| C1H2g01542 | 2:4,447,905-4,451,405 | - | C2H2g14951 | - | - | - | - | Detail |
| C1H2g30083 | 2:4,467,183-4,476,616 | + | C2H2g24841 | - | - | Os02g0189900 | - | Detail |
| C1H2g16474 | 2:4,469,625-4,474,498 | - | C2H2g18329 | CX2g021632 | LOC_Os02g09720 | Os02g0190000 | - | Detail |
| C1H2g07631 | 2:4,477,997-4,479,524 | + | C2H2g22278 | CX2g021632 | LOC_Os02g09710 | Os02g0190100 | - | Detail |
| C1H2g04187 | 2:4,484,254-4,493,683 | - | C2H2g18329 | CX2g021192 | LOC_Os02g09720 | Os02g0190300 | - | Detail |
| C1H2g21943 | 2:4,517,415-4,523,389 | + | C2H2g06769 | CX2g022054 | LOC_Os02g09740 | Os02g0190500 | - | Detail |
| C1H2g24836 | 2:4,524,050-4,525,519 | - | - | CX2g022421 | LOC_Os02g09750 | Os02g0190600 | OsLCYbeta, OsLCYβ | Detail |
| C1H2g15779 | 2:4,528,690-4,529,268 | - | C2H2g16178 | CX2g023142 | LOC_Os02g09760 | Os02g0190700 | - | Detail |
| C1H2g04808 | 2:4,534,144-4,538,120 | - | C2H2g05420 | CX2g021348 | LOC_Os02g09770 | Os02g0190800 | - | Detail |
| C1H2g13385 | 2:4,540,537-4,541,961 | - | C2H2g18343 | CX2g020459 | LOC_Os02g09780 | Os02g0190900 | - | Detail |
| C1H2g24338 | 2:4,558,602-4,561,334 | - | C2H2g20012 | CX2g022282 | LOC_Os02g09790 | Os02g0191000 | NBS-Str1 | Detail |
| C1H2g19462 | 2:4,564,768-4,566,899 | + | C2H2g13140 | CX2g024733 | LOC_Os02g09800 | Os02g0191200 | - | Detail |
| C1H2g16598 | 2:4,569,100-4,573,528 | - | C2H2g19527 | CX2g019369 | LOC_Os02g09810 | Os02g0191300 | OsATL6 | Detail |
| C1H2g02472 | 2:4,576,028-4,578,203 | + | C2H2g07551 | CX2g021648 | LOC_Os02g09820 | Os02g0191500 | - | Detail |
| C1H2g05141 | 2:4,579,357-4,579,866 | - | C2H2g25351 | CX2g022552 | LOC_Os02g09830 | Os02g0191600 | OsbZIP16 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053615 | 8:19,560,046-19,562,185 | + | C1H8g10748 | C2H8g07621 | LOC_Os08g35480 | Os08g0455800 | - | Detail |
| CX8g052656 | 8:19,563,723-19,564,241 | + | - | C2H8g22753 | LOC_Os08g35490 | Os08g0455900 | OsCOPT6 | Detail |
| CX8g051515 | 8:19,569,269-19,570,425 | - | C1H8g17790 | C2H8g23245 | LOC_Os08g35510 | Os08g0456200 | - | Detail |
| CX8g053693 | 8:19,583,915-19,584,670 | + | C1H8g18609 | C2H8g23126 | - | Os08g0456600 | GGC2 | Detail |
| CX8g050881 | 8:19,587,939-19,588,373 | + | - | C2H8g03530 | LOC_Os08g35560 | Os08g0457000 | - | Detail |
| CX8g052262 | 8:19,597,208-19,597,648 | + | - | - | LOC_Os08g35590 | Os08g0457300 | - | Detail |
| CX8g050648 | 8:19,599,148-19,601,617 | - | C1H8g01476 | C2H8g05374 | LOC_Os08g35600 | Os08g0457400 | - | Detail |
| CX8g054183 | 8:19,607,546-19,607,710 | + | C1H7g19019 | - | LOC_Os08g30140 | - | - | Detail |
| CX8g051932 | 8:19,616,449-19,616,679 | + | - | - | - | - | - | Detail |
| CX8g053976 | 8:19,621,365-19,625,394 | + | C1H8g29293 | C2H8g26236 | LOC_Os08g35620 | Os08g0457600 | - | Detail |
| CX8g052724 | 8:19,632,789-19,635,057 | + | C1H8g21210 | C2H8g20335 | LOC_Os08g35630 | Os08g0458200 | - | Detail |
| CX8g050819 | 8:19,644,964-19,648,994 | - | C1H8g03190 | C2H8g28640 | LOC_Os08g35650 | Os08g0458600 | - | Detail |
| CX8g054586 | 8:19,651,804-19,656,291 | - | C1H8g00079 | C2H8g07356 | LOC_Os08g35670 | Os08g0458600 | - | Detail |
| CX8g050910 | 8:19,670,857-19,677,114 | - | C1H8g05003 | C2H8g23440 | LOC_Os08g35700 | Os08g0459100 | - | Detail |
| CX8g052480 | 8:19,688,979-19,689,566 | - | C1H8g26743 | C2H8g11496 | LOC_Os08g35710 | Os08g0459300 | - | Detail |
| CX8g051715 | 8:19,696,763-19,697,542 | + | - | - | - | - | - | Detail |
| CX8g051370 | 8:19,701,702-19,704,634 | + | C1H8g05129 | C2H8g20588 | LOC_Os08g35740 | Os08g0459600 | OPR7, OsOPR08-1, OsOPR13, OsOPR7 | Detail |
| CX8g051144 | 8:19,708,658-19,709,317 | - | - | C2H8g08968 | LOC_Os08g35750 | Os08g0459700 | - | Detail |
| CX8g052731 | 8:19,720,794-19,721,435 | - | - | C2H8g07414 | LOC_Os08g35760 | Os08g0460000 | OsGLP1 | Detail |
| CX8g054079 | 8:19,729,058-19,729,222 | - | - | - | - | - | - | Detail |