| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21930 | 3:32,150,556-32,154,996 | + | C1H3g04060 | CX3g029514 | LOC_Os03g62200 | Os03g0838400 | - | Detail |
| C2H3g30547 | 3:32,154,179-32,155,651 | - | C1H3g30110 | - | - | - | - | Detail |
| C2H3g29109 | 3:32,155,144-32,155,530 | + | C1H3g03475 | CX3g029120 | LOC_Os03g62210 | Os03g0838500 | - | Detail |
| C2H3g14459 | 3:32,163,817-32,165,237 | - | C1H3g08024 | CX3g028242 | LOC_Os03g62240 | Os03g0838900 | - | Detail |
| C2H3g18580 | 3:32,166,727-32,169,276 | - | C1H3g14166 | CX3g026663 | LOC_Os03g62250 | Os03g0839000 | - | Detail |
| C2H3g04219 | 3:32,170,446-32,174,439 | - | C1H3g19313 | CX3g026956 | LOC_Os03g62260 | Os03g0839100 | - | Detail |
| C2H3g25899 | 3:32,181,533-32,185,188 | + | C1H3g09907 | CX3g025647 | LOC_Os03g62270 | Os03g0839200 | SMG4 | Detail |
| C2H3g29754 | 3:32,199,447-32,199,857 | - | C1H3g11170 | CX3g026655 | LOC_Os03g62330 | Os03g0839800 | - | Detail |
| C2H3g16491 | 3:32,205,796-32,210,390 | - | C1H3g19828 | CX3g027925 | LOC_Os03g62340 | Os03g0839900 | - | Detail |
| C2H3g23134 | 3:32,225,617-32,234,890 | - | C1H3g10496 | CX3g027463 | LOC_Os03g62388 | Os03g0840500 | - | Detail |
| C2H3g17763 | 3:32,236,269-32,239,656 | - | C1H3g17885 | CX3g031342 | LOC_Os03g62400 | Os03g0627100 | - | Detail |
| C2H3g05770 | 3:32,240,626-32,245,153 | - | C1H3g03752 | CX3g030069 | LOC_Os03g62410 | Os03g0840800 | - | Detail |
| C2H3g27419 | 3:32,246,352-32,249,035 | - | C1H3g30697 | CX3g028979 | LOC_Os03g62420 | Os03g0840900 | DVB1 | Detail |
| C2H3g06584 | 3:32,250,917-32,255,271 | - | C1H3g04157 | CX3g025236 | LOC_Os03g62430 | Os03g0841100 | - | Detail |
| C2H3g20263 | 3:32,261,597-32,263,501 | - | C1H3g25165 | CX3g025448 | LOC_Os03g62490 | Os03g0841700 | - | Detail |
| C2H3g22865 | 3:32,264,375-32,270,473 | - | C1H3g04020 | CX3g031204 | LOC_Os03g62500 | Os03g0841800 | - | Detail |
| C2H3g23885 | 3:32,271,472-32,276,749 | - | C1H3g13920 | CX3g029829 | LOC_Os03g62510 | Os03g0841900 | - | Detail |
| C2H3g18445 | 3:32,292,035-32,295,016 | + | C1H3g00003 | CX3g029998 | LOC_Os03g62580 | Os03g0842700 | - | Detail |
| C2H3g22112 | 3:32,296,303-32,298,057 | - | C1H3g05358 | CX3g025495 | LOC_Os03g62590 | Os03g0842900 | OsHSD2 | Detail |
| C2H3g14550 | 3:32,300,122-32,301,481 | - | C1H3g18020 | CX3g028475 | LOC_Os03g62600 | Os03g0843100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g050484 | 8:19,269,845-19,279,743 | + | C1H8g30158 | C2H8g11229 | LOC_Os08g34950 | Os08g0450700 | - | Detail |
| CX8g051859 | 8:19,282,626-19,293,393 | + | C1H8g07166 | C2H8g15174 | LOC_Os08g34970 | Os08g0451000 | - | Detail |
| CX8g052464 | 8:19,296,782-19,299,247 | - | C1H8g20554 | - | LOC_Os01g04250 | Os01g0134200 | - | Detail |
| CX8g053648 | 8:19,308,459-19,309,213 | + | C1H8g31180 | C2H8g14737 | LOC_Os08g34984 | Os08g0451200 | - | Detail |
| CX8g051602 | 8:19,311,641-19,311,970 | + | C1H8g06815 | C2H8g26486 | LOC_Os08g34990 | - | - | Detail |
| CX8g051534 | 8:19,313,821-19,321,898 | - | C1H8g17768 | C2H8g11008 | LOC_Os08g35000 | Os08g0451400 | - | Detail |
| CX8g053312 | 8:19,343,664-19,350,691 | - | C1H8g26717 | C2H8g24754 | LOC_Os08g35010 | Os08g0451700 | - | Detail |
| CX8g052571 | 8:19,361,481-19,362,570 | + | C1H8g21130 | C2H8g03066 | LOC_Os08g35060 | Os08g0451800 | - | Detail |
| CX8g054064 | 8:19,370,118-19,372,514 | + | C1H8g03517 | C2H8g21188 | LOC_Os08g35090 | Os08g0452100 | - | Detail |
| CX8g051689 | 8:19,380,923-19,381,456 | - | - | - | - | Os08g0411000 | - | Detail |
| CX8g052859 | 8:19,396,063-19,396,779 | + | - | - | - | - | - | Detail |
| CX8g050512 | 8:19,414,432-19,415,828 | + | C1H8g25600 | C2H8g03087 | LOC_Os08g35160 | Os08g0452900 | - | Detail |
| CX8g054363 | 8:19,439,627-19,440,628 | + | C1H8g17402 | C2H8g04966 | LOC_Os08g35190 | Os08g0453200 | - | Detail |
| CX8g052652 | 8:19,459,303-19,468,184 | + | C1H8g22805 | C2H8g28855 | LOC_Os08g35210 | Os08g0453700 | - | Detail |
| CX8g053639 | 8:19,472,530-19,475,979 | - | C1H8g03077 | C2H8g29629 | LOC_Os08g35220 | Os08g0453800 | - | Detail |
| CX8g052965 | 8:19,482,666-19,483,274 | + | - | C2H8g04997 | LOC_Os08g35240 | Os08g0454000 | ERF12, OsERF#012, OsERF012, OsERF12, OsDERF1, DERF1, AP2/EREBP#070, AP2/EREBP70 | Detail |
| CX8g052299 | 8:19,484,756-19,484,908 | - | - | - | - | - | - | Detail |
| CX8g053464 | 8:19,533,089-19,535,246 | - | C1H8g08623 | - | LOC_Os08g35310 | Os08g0454500 | - | Detail |
| CX8g050863 | 8:19,544,434-19,545,553 | + | C1H8g26901 | C2H8g25345 | LOC_Os08g35440 | Os08g0455600 | - | Detail |
| CX8g052383 | 8:19,554,612-19,556,537 | + | C1H8g02642 | C2H8g05103 | LOC_Os08g35470 | Os08g0455700 | - | Detail |