| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22655 | 4:18,351,919-18,352,857 | - | C1H4g14575 | CX4g034540 | LOC_Os04g35300 | Os04g0432600 | - | Detail |
| C2H4g20356 | 4:18,354,135-18,356,123 | - | C1H4g23042 | CX4g035650 | LOC_Os04g35305 | Os04g0432800 | - | Detail |
| C2H4g07440 | 4:18,363,696-18,364,862 | - | C1H4g18091 | CX4g036629 | LOC_Os04g35310 | Os04g0625600 | - | Detail |
| C2H4g18419 | 4:18,367,836-18,368,936 | - | C1H4g18091 | CX4g036629 | LOC_Os04g35370 | Os04g0625600 | - | Detail |
| C2H4g22168 | 4:18,393,411-18,398,613 | + | C1H4g18234 | CX4g032398 | LOC_Os04g35380 | Os04g0433200 | - | Detail |
| C2H4g19405 | 4:18,405,988-18,407,176 | + | C1H4g24371 | CX4g032298 | LOC_Os04g35390 | Os04g0433300 | - | Detail |
| C2H4g16542 | 4:18,415,440-18,416,284 | - | - | CX4g034124 | - | - | - | Detail |
| C2H4g19627 | 4:18,420,191-18,424,424 | - | C1H4g04051 | CX4g033528 | LOC_Os04g35410 | Os04g0433600 | - | Detail |
| C2H4g01376 | 4:18,429,634-18,439,552 | - | C1H4g09671 | CX4g032013 | LOC_Os04g35420 | Os04g0433800 | OsRecQl4 | Detail |
| C2H4g24266 | 4:18,441,437-18,447,918 | - | C1H4g26209 | CX4g032480 | LOC_Os04g35430 | Os04g0433900 | - | Detail |
| C2H4g14516 | 4:18,458,990-18,462,658 | - | C1H4g16755 | CX4g036182 | LOC_Os04g35480 | Os04g0434300 | - | Detail |
| C2H4g03670 | 4:18,463,122-18,464,800 | + | C1H4g01137 | CX4g033477 | LOC_Os04g35490 | Os04g0434400 | - | Detail |
| C2H4g25515 | 4:18,468,880-18,469,746 | - | - | CX4g033142 | LOC_Os04g35500 | Os04g0434500 | - | Detail |
| C2H4g12666 | 4:18,479,928-18,491,060 | - | C1H4g18837 | CX4g033597 | LOC_Os04g35510 | Os04g0434600 | - | Detail |
| C2H4g00913 | 4:18,493,722-18,498,080 | - | C1H4g16208 | CX4g035656 | LOC_Os04g35520 | Os04g0434800 | OsAPX7, sAPX | Detail |
| C2H4g20243 | 4:18,501,386-18,506,382 | + | C1H4g09329 | CX4g035680 | LOC_Os04g35530 | Os04g0434900 | - | Detail |
| C2H4g06857 | 4:18,510,663-18,515,273 | + | C1H4g19761 | CX4g036436 | LOC_Os04g35540 | Os04g0435100 | - | Detail |
| C2H4g27190 | 4:18,518,883-18,534,264 | - | - | - | - | - | - | Detail |
| C2H4g24818 | 4:18,535,610-18,537,887 | - | C1H4g18209 | CX4g032696 | LOC_Os04g35560 | Os04g0435500 | - | Detail |
| C2H4g14359 | 4:18,551,659-18,556,886 | + | C1H4g19177 | CX4g035624 | LOC_Os04g35570 | Os04g0435700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000886 | 1:28,960,372-28,969,937 | - | C1H1g14323 | C2H1g13364 | LOC_Os02g26510 | Os01g0646800 | - | Detail |
| CX1g005201 | 1:28,970,753-28,972,250 | - | C1H1g10000 | C2H1g28135 | LOC_Os01g56210 | Os01g0768100 | - | Detail |
| CX1g001137 | 1:28,973,626-28,979,619 | - | C1H1g17993 | C2H1g27536 | LOC_Os01g56230 | Os01g0768200 | - | Detail |
| CX1g002315 | 1:28,982,073-28,984,101 | - | C1H1g11693 | C2H1g26550 | LOC_Os01g56235 | Os01g0768300 | - | Detail |
| CX1g002605 | 1:28,985,885-28,986,253 | + | C1H1g01409 | C2H1g30140 | LOC_Os01g56240 | Os01g0768333 | OsSAUR2 | Detail |
| CX1g000267 | 1:28,994,997-29,003,314 | + | C1H1g26530 | C2H1g24802 | LOC_Os01g56290 | Os01g0768700 | - | Detail |
| CX1g006707 | 1:29,005,671-29,011,804 | + | C1H1g14692 | C2H1g13364 | LOC_Os12g42990 | - | - | Detail |
| CX1g001998 | 1:29,018,396-29,024,099 | + | C1H1g30094 | C2H1g11170 | LOC_Os01g56300 | Os01g0769000 | - | Detail |
| CX1g000941 | 1:29,025,650-29,028,504 | + | C1H1g21992 | C2H1g06053 | LOC_Os01g56310 | - | - | Detail |
| CX1g005759 | 1:29,029,057-29,029,281 | - | C1H1g09179 | C2H1g14114 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| CX1g003020 | 1:29,030,909-29,031,229 | - | - | - | - | - | - | Detail |
| CX1g007250 | 1:29,034,693-29,034,884 | - | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g000768 | 1:29,039,918-29,045,001 | + | C1H1g21169 | C2H1g08866 | LOC_Os01g56320 | Os01g0769200 | - | Detail |
| CX1g006832 | 1:29,052,060-29,053,328 | + | C1H1g11804 | C2H1g04146 | LOC_Os01g56330 | Os01g0769700 | - | Detail |
| CX1g006851 | 1:29,055,377-29,060,105 | + | C1H1g24029 | C2H1g27214 | LOC_Os01g56350 | Os01g0769900 | TCM1 | Detail |
| CX1g006734 | 1:29,060,397-29,063,978 | - | C1H1g10932 | C2H1g25114 | LOC_Os01g56360 | Os01g0770000 | - | Detail |
| CX1g006846 | 1:29,066,867-29,072,094 | - | C1H1g12311 | C2H1g18480 | LOC_Os01g56360 | Os01g0770000 | - | Detail |
| CX1g006639 | 1:29,072,700-29,072,879 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g002039 | 1:29,077,745-29,077,984 | - | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g000584 | 1:29,080,615-29,082,210 | - | C1H1g07110 | C2H10g16117 | LOC_Os01g56380 | Os01g0770200 | TYDC, TyDC, OsTyDC, OsTYDC, TDC | Detail |