| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g27799 | 2:10,889,258-10,895,990 | - | C1H2g02006 | CX2g024087 | LOC_Os02g20380 | Os02g0306550 | - | Detail |
| C2H2g18881 | 2:10,902,489-10,906,883 | + | C1H2g24564 | CX2g023445 | LOC_Os02g20394 | Os02g0306900 | - | Detail |
| C2H2g01993 | 2:10,907,914-10,918,873 | - | C1H2g10247 | CX2g019378 | LOC_Os02g20410 | Os02g0307000 | - | Detail |
| C2H2g17060 | 2:10,938,376-10,938,907 | - | C1H2g29716 | - | LOC_Os02g20420 | Os02g0307700 | - | Detail |
| C2H2g12366 | 2:10,938,920-10,939,510 | - | - | - | LOC_Os02g20480 | Os02g0307700 | - | Detail |
| C2H2g03940 | 2:10,940,544-10,940,816 | - | C1H2g13208 | CX8g051910 | LOC_Os02g20420 | Os02g0307700 | - | Detail |
| C2H2g00609 | 2:10,945,824-10,948,380 | + | C1H2g21706 | CX2g024441 | LOC_Os02g20430 | Os02g0307200 | - | Detail |
| C2H2g05548 | 2:10,952,678-10,955,685 | + | C1H2g30513 | CX2g022952 | LOC_Os02g20490 | Os02g0307800 | - | Detail |
| C2H2g14176 | 2:10,957,448-10,958,855 | - | C1H2g11957 | CX2g019633 | LOC_Os02g20500 | Os02g0307900 | - | Detail |
| C2H2g19086 | 2:10,970,171-10,971,209 | + | C1H2g23038 | CX2g020850 | LOC_Os02g20530 | - | - | Detail |
| C2H2g18649 | 2:10,972,380-10,973,611 | + | C1H2g23038 | CX2g024638 | LOC_Os02g20530 | - | - | Detail |
| C2H2g01315 | 2:10,993,658-10,999,842 | + | C1H5g22811 | - | LOC_Os03g61860 | - | - | Detail |
| C2H2g08020 | 2:10,996,222-10,999,854 | - | - | - | - | - | - | Detail |
| C2H2g07390 | 2:11,000,401-11,001,498 | - | - | CX2g020226 | LOC_Os02g20690 | Os02g0310500 | - | Detail |
| C2H2g01622 | 2:11,022,195-11,023,139 | - | C1H2g13376 | CX2g019736 | - | - | - | Detail |
| C2H2g18583 | 2:11,054,501-11,056,745 | - | C1H2g10228 | - | - | - | - | Detail |
| C2H2g27241 | 2:11,074,354-11,077,700 | + | C1H2g29934 | CX2g020980 | LOC_Os02g20844 | Os02g0312500 | - | Detail |
| C2H2g22403 | 2:11,078,881-11,080,817 | - | C1H2g02374 | CX2g021295 | LOC_Os02g20850 | Os02g0312600 | - | Detail |
| C2H2g30007 | 2:11,085,936-11,090,157 | - | C1H2g01994 | CX2g019951 | LOC_Os02g20860 | Os02g0312700 | - | Detail |
| C2H2g10615 | 2:11,096,668-11,104,431 | - | C1H2g26299 | CX2g023859 | LOC_Os02g20870 | Os02g0312800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000886 | 1:28,960,372-28,969,937 | - | C1H1g14323 | C2H1g13364 | LOC_Os02g26510 | Os01g0646800 | - | Detail |
| CX1g005201 | 1:28,970,753-28,972,250 | - | C1H1g10000 | C2H1g28135 | LOC_Os01g56210 | Os01g0768100 | - | Detail |
| CX1g001137 | 1:28,973,626-28,979,619 | - | C1H1g17993 | C2H1g27536 | LOC_Os01g56230 | Os01g0768200 | - | Detail |
| CX1g002315 | 1:28,982,073-28,984,101 | - | C1H1g11693 | C2H1g26550 | LOC_Os01g56235 | Os01g0768300 | - | Detail |
| CX1g002605 | 1:28,985,885-28,986,253 | + | C1H1g01409 | C2H1g30140 | LOC_Os01g56240 | Os01g0768333 | OsSAUR2 | Detail |
| CX1g000267 | 1:28,994,997-29,003,314 | + | C1H1g26530 | C2H1g24802 | LOC_Os01g56290 | Os01g0768700 | - | Detail |
| CX1g006707 | 1:29,005,671-29,011,804 | + | C1H1g14692 | C2H1g13364 | LOC_Os12g42990 | - | - | Detail |
| CX1g001998 | 1:29,018,396-29,024,099 | + | C1H1g30094 | C2H1g11170 | LOC_Os01g56300 | Os01g0769000 | - | Detail |
| CX1g000941 | 1:29,025,650-29,028,504 | + | C1H1g21992 | C2H1g06053 | LOC_Os01g56310 | - | - | Detail |
| CX1g005759 | 1:29,029,057-29,029,281 | - | C1H1g09179 | C2H1g14114 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| CX1g003020 | 1:29,030,909-29,031,229 | - | - | - | - | - | - | Detail |
| CX1g007250 | 1:29,034,693-29,034,884 | - | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g000768 | 1:29,039,918-29,045,001 | + | C1H1g21169 | C2H1g08866 | LOC_Os01g56320 | Os01g0769200 | - | Detail |
| CX1g006832 | 1:29,052,060-29,053,328 | + | C1H1g11804 | C2H1g04146 | LOC_Os01g56330 | Os01g0769700 | - | Detail |
| CX1g006851 | 1:29,055,377-29,060,105 | + | C1H1g24029 | C2H1g27214 | LOC_Os01g56350 | Os01g0769900 | TCM1 | Detail |
| CX1g006734 | 1:29,060,397-29,063,978 | - | C1H1g10932 | C2H1g25114 | LOC_Os01g56360 | Os01g0770000 | - | Detail |
| CX1g006846 | 1:29,066,867-29,072,094 | - | C1H1g12311 | C2H1g18480 | LOC_Os01g56360 | Os01g0770000 | - | Detail |
| CX1g006639 | 1:29,072,700-29,072,879 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g002039 | 1:29,077,745-29,077,984 | - | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g000584 | 1:29,080,615-29,082,210 | - | C1H1g07110 | C2H10g16117 | LOC_Os01g56380 | Os01g0770200 | TYDC, TyDC, OsTyDC, OsTYDC, TDC | Detail |