| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g00809 | 5:11,982,210-11,984,061 | - | C2H5g18962 | CX5g037533 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| C1H5g07771 | 5:12,001,890-12,004,026 | + | C2H5g16379 | CX5g040926 | LOC_Os05g25600 | Os05g0320300 | - | Detail |
| C1H5g18434 | 5:12,005,370-12,006,031 | + | C2H5g17208 | CX5g040614 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| C1H5g11691 | 5:12,012,645-12,014,131 | - | C2H5g12884 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C1H5g29408 | 5:12,015,766-12,016,554 | - | C2H5g12884 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C1H5g31853 | 5:12,053,670-12,054,445 | + | C2H5g23272 | CX5g039065 | - | Os05g0321900 | - | Detail |
| C1H5g21190 | 5:12,055,039-12,058,391 | + | C2H5g30247 | CX5g039065 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| C1H5g09562 | 5:12,072,384-12,073,544 | + | C2H5g20457 | CX5g039731 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| C1H5g20684 | 5:12,079,618-12,082,497 | + | C2H5g00966 | CX5g037483 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| C1H5g15138 | 5:12,088,755-12,088,970 | - | C2H5g12832 | CX5g037550 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| C1H5g03510 | 5:12,094,616-12,098,484 | + | C2H5g27944 | - | - | - | - | Detail |
| C1H5g02171 | 5:12,094,751-12,098,348 | - | C2H5g23193 | CX5g037938 | - | Os05g0475600 | - | Detail |
| C1H5g07569 | 5:12,110,411-12,114,059 | + | C2H5g25840 | CX5g038231 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| C1H5g09336 | 5:12,115,350-12,119,558 | + | C2H5g02562 | CX5g039355 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| C1H5g18365 | 5:12,121,188-12,122,633 | + | C2H5g29319 | CX5g038450 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C1H5g16408 | 5:12,140,296-12,142,180 | + | C2H5g21674 | CX5g037596 | LOC_Os05g25170 | - | - | Detail |
| C1H5g24963 | 5:12,142,187-12,144,548 | + | C2H5g11879 | CX12g015435 | LOC_Os05g25170 | - | - | Detail |
| C1H5g19700 | 5:12,146,724-12,149,612 | + | C2H5g22294 | CX5g038330 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C1H5g26142 | 5:12,149,959-12,153,426 | - | C2H5g05113 | CX5g040251 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| C1H5g26115 | 5:12,158,868-12,160,517 | + | C2H5g07422 | CX5g041147 | LOC_Os05g25890 | Os05g0324300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g052009 | 8:19,045,115-19,045,294 | + | - | - | - | - | - | Detail |
| CX8g052651 | 8:19,056,432-19,056,608 | - | - | - | - | - | - | Detail |
| CX8g053006 | 8:19,061,051-19,061,499 | - | - | - | - | - | - | Detail |
| CX8g050634 | 8:19,066,624-19,066,908 | - | - | C2H8g22394 | - | - | - | Detail |
| CX8g052049 | 8:19,067,695-19,071,479 | - | C1H8g27871 | C2H8g01307 | LOC_Os08g34640 | Os08g0446200 | - | Detail |
| CX8g052220 | 8:19,077,515-19,084,625 | - | C1H8g05995 | C2H8g22360 | LOC_Os08g34650 | Os08g0446400 | - | Detail |
| CX8g050530 | 8:19,124,636-19,125,037 | + | - | C2H8g13594 | LOC_Os08g34700 | Os08g0446800 | - | Detail |
| CX8g053145 | 8:19,126,557-19,126,709 | + | - | - | - | - | - | Detail |
| CX8g054140 | 8:19,148,277-19,153,878 | - | C1H8g18214 | C2H8g13972 | LOC_Os08g34720 | Os08g0447000 | OsPGDH2 | Detail |
| CX8g052869 | 8:19,164,555-19,169,425 | - | C1H8g06120 | C2H8g16164 | LOC_Os08g34740 | Os08g0447200 | - | Detail |
| CX8g054614 | 8:19,170,734-19,175,161 | - | C1H8g08693 | C2H8g22909 | LOC_Os08g34750 | Os08g0447300 | - | Detail |
| CX8g052274 | 8:19,179,852-19,183,998 | - | C1H8g31742 | C2H8g14072 | LOC_Os08g34760 | Os08g0447500 | - | Detail |
| CX8g053619 | 8:19,191,929-19,195,376 | + | C1H8g18525 | C2H8g26353 | LOC_Os08g34780 | Os08g0447900 | - | Detail |
| CX8g051108 | 8:19,195,897-19,197,936 | - | C1H8g31226 | C2H8g22911 | LOC_Os08g34790 | Os08g0448000 | 4CL5, Os4CL5 | Detail |
| CX8g052929 | 8:19,198,787-19,199,023 | + | - | - | - | - | - | Detail |
| CX8g052718 | 8:19,211,819-19,212,310 | + | - | C2H8g12679 | LOC_Os08g34800 | Os08g0448100 | - | Detail |
| CX8g052194 | 8:19,218,295-19,219,118 | - | - | - | LOC_Os08g37080 | - | - | Detail |
| CX8g053919 | 8:19,238,163-19,238,327 | - | - | - | - | Os01g0863100 | - | Detail |
| CX8g051958 | 8:19,248,169-19,251,412 | + | C1H8g26316 | C2H8g03859 | LOC_Os08g34900 | Os08g0450100 | - | Detail |
| CX8g051427 | 8:19,251,809-19,253,977 | - | C1H8g08234 | C2H8g08689 | LOC_Os08g34910 | Os08g0450200 | - | Detail |