| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17694 | 5:1,387,037-1,392,794 | - | C2H5g16712 | CX5g039622 | LOC_Os05g03640 | Os05g0127500 | - | Detail |
| C1H5g12303 | 5:1,415,004-1,416,476 | + | C2H5g05001 | CX5g040566 | LOC_Os05g03750 | Os05g0128100 | - | Detail |
| C1H5g14002 | 5:1,429,621-1,431,545 | - | C2H5g10735 | CX5g039214 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| C1H5g27203 | 5:1,437,526-1,440,847 | - | C2H5g15512 | CX5g038112 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| C1H5g26071 | 5:1,450,527-1,454,746 | + | C2H5g12644 | CX5g037779 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| C1H5g17726 | 5:1,457,853-1,459,708 | + | C2H5g20670 | CX5g036800 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| C1H5g20738 | 5:1,460,007-1,462,175 | - | C2H5g08741 | CX5g040768 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| C1H5g14331 | 5:1,494,591-1,500,309 | - | C2H5g24745 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C1H5g16799 | 5:1,506,515-1,508,333 | - | C2H5g23667 | - | - | - | - | Detail |
| C1H5g11198 | 5:1,513,727-1,514,565 | + | C2H5g10940 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C1H5g15292 | 5:1,515,259-1,519,290 | - | C2H5g13765 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C1H5g09306 | 5:1,522,797-1,526,818 | + | C2H5g20349 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C1H5g02682 | 5:1,541,276-1,542,253 | - | C2H5g13879 | - | - | - | - | Detail |
| C1H5g31896 | 5:1,558,184-1,566,344 | - | C2H5g28718 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C1H5g15210 | 5:1,573,177-1,573,586 | - | C2H5g08536 | - | - | Os05g0130500 | - | Detail |
| C1H5g13927 | 5:1,578,202-1,582,694 | - | C2H5g17204 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C1H5g19982 | 5:1,584,559-1,585,021 | + | C2H5g23034 | CX5g038388 | - | - | - | Detail |
| C1H5g21167 | 5:1,586,510-1,587,802 | + | C2H5g10179 | - | - | - | - | Detail |
| C1H5g11003 | 5:1,594,377-1,596,806 | - | C2H5g12456 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C1H5g23202 | 5:1,599,408-1,603,800 | - | C2H5g08847 | - | LOC_Os05g04110 | Os05g0131401 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053025 | 8:18,718,988-18,723,071 | + | C1H8g20273 | C2H8g25672 | LOC_Os08g34070 | Os08g0439150 | - | Detail |
| CX8g051823 | 8:18,733,609-18,734,823 | + | C1H9g23281 | C2H8g27178 | LOC_Os08g34120 | Os08g0439600 | - | Detail |
| CX8g052245 | 8:18,737,986-18,739,425 | + | C1H8g26690 | C2H8g21313 | LOC_Os08g34130 | Os08g0439900 | - | Detail |
| CX8g053193 | 8:18,740,578-18,742,398 | - | C1H8g06058 | C2H8g04622 | LOC_Os08g34140 | Os08g0440000 | - | Detail |
| CX8g051094 | 8:18,746,719-18,747,330 | + | C1H8g24760 | C2H8g01359 | LOC_Os08g34150 | Os08g0440100 | - | Detail |
| CX8g054498 | 8:18,749,992-18,754,879 | + | C1H8g09641 | C2H8g07704 | LOC_Os08g34160 | Os08g0440200 | - | Detail |
| CX8g053893 | 8:18,757,729-18,758,601 | + | C1H9g27565 | C2H8g01898 | LOC_Os08g34170 | Os08g0440300 | - | Detail |
| CX8g054137 | 8:18,770,702-18,773,319 | - | C1H8g21727 | C2H8g12751 | LOC_Os08g34190 | Os08g0440500 | OsSDF2-2 | Detail |
| CX8g052265 | 8:18,782,243-18,786,931 | + | C1H8g02297 | C2H8g02220 | LOC_Os08g34210 | Os08g0440800 | - | Detail |
| CX8g050759 | 8:18,787,679-18,792,058 | - | C1H8g11295 | C2H8g17963 | LOC_Os08g34220 | Os08g0440900 | - | Detail |
| CX8g051987 | 8:18,797,470-18,798,753 | + | C1H8g08760 | C2H8g22904 | LOC_Os08g34240 | Os08g0441100 | - | Detail |
| CX8g053950 | 8:18,806,347-18,806,547 | + | C1H8g15866 | C2H8g01722 | LOC_Os08g34258 | Os08g0441200 | OsPI8-1a | Detail |
| CX8g052420 | 8:18,820,718-18,821,113 | + | C1H8g19325 | - | - | - | - | Detail |
| CX8g050556 | 8:18,821,755-18,822,317 | + | C1H8g09117 | C2H8g28579 | LOC_Os08g34270 | Os08g0441400 | - | Detail |
| CX8g054159 | 8:18,827,420-18,833,839 | - | C1H8g11966 | C2H8g07640 | LOC_Os08g34280 | Os08g0441500 | - | Detail |
| CX8g054191 | 8:18,838,455-18,838,891 | - | - | C2H8g28836 | - | - | - | Detail |
| CX8g053747 | 8:18,845,500-18,847,828 | + | C1H8g04076 | C2H8g24495 | LOC_Os08g34290 | Os08g0441600 | OsCM | Detail |
| CX8g052603 | 8:18,848,423-18,850,892 | - | C1H8g01929 | C2H8g24888 | LOC_Os08g34310 | Os08g0441900 | - | Detail |
| CX8g051309 | 8:18,860,900-18,864,562 | - | C1H8g20985 | C2H8g22091 | LOC_Os08g34320 | Os08g0442000 | - | Detail |
| CX8g054202 | 8:18,873,009-18,874,399 | - | C1H8g07969 | C2H8g17741 | LOC_Os08g34330 | Os08g0442200 | - | Detail |