| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g00595 | 5:20,255,544-20,257,753 | + | C1H5g12778 | CX5g040097 | LOC_Os05g41010 | Os05g0489100 | - | Detail |
| C2H5g23469 | 5:20,260,244-20,261,460 | - | C1H5g22216 | - | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C2H5g15924 | 5:20,261,918-20,262,334 | - | C1H5g05615 | CX5g037795 | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C2H5g27372 | 5:20,265,804-20,269,075 | - | C1H5g29364 | CX5g037436 | LOC_Os05g41060 | Os05g0489600 | - | Detail |
| C2H5g09500 | 5:20,272,302-20,274,674 | + | C1H5g11382 | CX5g037252 | LOC_Os05g41070 | Os05g0489700 | HBF1, OsbZIP42 | Detail |
| C2H5g01943 | 5:20,276,334-20,276,600 | + | C1H5g00326 | CX5g039059 | - | Os05g0489750 | - | Detail |
| C2H5g05322 | 5:20,277,356-20,279,584 | - | C1H5g30374 | CX5g039132 | LOC_Os05g41080 | Os05g0489800 | OsCENH3 | Detail |
| C2H5g07453 | 5:20,280,953-20,284,731 | - | C1H5g17926 | CX5g038078 | LOC_Os05g41090 | Os05g0489900 | DMI3, OsDMI3, OsCCaMK1, OsCCaMK, OsCCAMK, CCAMK | Detail |
| C2H5g20839 | 5:20,285,634-20,287,613 | - | C1H5g27285 | CX5g037785 | LOC_Os05g41100 | Os05g0490000 | - | Detail |
| C2H5g02383 | 5:20,287,853-20,289,688 | + | C1H5g14042 | CX5g039362 | LOC_Os05g41110 | Os05g0490100 | - | Detail |
| C2H5g16191 | 5:20,290,572-20,296,794 | + | C1H5g00258 | CX5g038500 | LOC_Os05g41120 | Os05g0490200 | - | Detail |
| C2H5g27761 | 5:20,299,690-20,300,745 | - | C1H5g17707 | CX5g037621 | LOC_Os05g41130 | Os05g0490300 | - | Detail |
| C2H5g07017 | 5:20,308,897-20,315,355 | - | C1H5g17579 | CX5g039490 | LOC_Os05g41150 | Os05g0490400 | - | Detail |
| C2H5g07145 | 5:20,316,323-20,318,633 | - | C1H5g31086 | CX5g038921 | LOC_Os05g41166 | Os05g0490600 | CSA2 | Detail |
| C2H5g25171 | 5:20,322,902-20,328,726 | - | C1H5g16631 | CX5g037848 | LOC_Os05g41172 | Os05g0490700 | - | Detail |
| C2H5g06467 | 5:20,329,937-20,332,796 | - | C1H5g03177 | CX5g037157 | LOC_Os05g41180 | Os05g0490800 | - | Detail |
| C2H5g15902 | 5:20,336,078-20,336,922 | - | C1H5g04917 | - | LOC_Os05g41190 | Os05g0490900 | - | Detail |
| C2H5g03482 | 5:20,339,026-20,339,554 | - | C1H5g01262 | CX5g040781 | LOC_Os05g41200 | Os05g0491000 | OsCML9 | Detail |
| C2H5g27006 | 5:20,340,490-20,343,661 | - | C1H5g17633 | CX5g040781 | LOC_Os05g41210 | Os05g0491100 | - | Detail |
| C2H5g10562 | 5:20,347,115-20,349,730 | - | C1H5g22455 | CX5g040781 | LOC_Os05g41220 | Os05g0491200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g054051 | 8:17,428,585-17,428,773 | + | - | - | - | - | - | Detail |
| CX8g054622 | 8:17,433,018-17,443,763 | - | C1H8g12955 | C2H8g14349 | LOC_Os08g32090 | Os08g0416100 | - | Detail |
| CX8g050707 | 8:17,448,355-17,453,740 | - | C1H8g19057 | C2H8g02250 | LOC_Os08g32100 | Os08g0416400 | - | Detail |
| CX8g051894 | 8:17,455,326-17,455,646 | + | - | - | LOC_Os08g38150 | - | - | Detail |
| CX8g051121 | 8:17,462,083-17,462,337 | + | C1H8g02967 | C2H8g15868 | LOC_Os08g32120 | Os08g0416800 | - | Detail |
| CX8g053345 | 8:17,466,056-17,466,556 | + | - | - | - | - | - | Detail |
| CX8g053537 | 8:17,480,441-17,483,136 | + | C1H8g02179 | C2H8g14521 | LOC_Os08g32130 | Os08g0416900 | OsV<sub>5B</sub> | Detail |
| CX8g052961 | 8:17,490,642-17,492,092 | - | C1H8g21994 | C2H8g03382 | LOC_Os08g32160 | Os08g0417000 | - | Detail |
| CX8g051440 | 8:17,496,058-17,497,210 | - | C1H8g05346 | C2H8g28621 | LOC_Os08g32170 | Os08g0417100 | - | Detail |
| CX8g054241 | 8:17,514,965-17,515,732 | + | C1H8g09717 | C2H8g01267 | LOC_Os08g32330 | Os08g0418600 | - | Detail |
| CX8g051398 | 8:17,518,081-17,518,764 | + | C1H8g24965 | C2H8g10807 | LOC_Os08g32330 | Os08g0418600 | - | Detail |
| CX8g052879 | 8:17,526,510-17,528,888 | + | C1H8g15175 | C2H8g03608 | LOC_Os08g32360 | Os08g0419100 | - | Detail |
| CX8g050870 | 8:17,571,212-17,572,128 | + | C1H8g08639 | C2H8g06898 | LOC_Os08g32390 | - | - | Detail |
| CX8g052175 | 8:17,618,253-17,618,408 | - | - | - | - | - | - | Detail |
| CX8g054391 | 8:17,620,945-17,621,643 | + | - | - | - | - | - | Detail |
| CX8g050783 | 8:17,630,872-17,634,133 | + | C1H8g12225 | C2H8g06903 | LOC_Os08g32500 | Os08g0420600 | - | Detail |
| CX8g054220 | 8:17,644,696-17,645,495 | + | C1H8g30390 | C2H8g16365 | LOC_Os08g32520 | Os08g0420700 | - | Detail |
| CX8g052355 | 8:17,649,222-17,649,437 | + | C1H4g02282 | C2H8g00281 | LOC_Os04g58760 | Os04g0684300 | OsCASP1 | Detail |
| CX8g051142 | 8:17,652,151-17,652,459 | - | - | - | - | Os08g0420800 | - | Detail |
| CX8g054489 | 8:17,653,582-17,654,115 | + | - | C2H8g23399 | LOC_Os08g32530 | Os08g0421000 | - | Detail |