| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g10053 | 4:22,556,566-22,561,222 | - | C2H4g00297 | CX4g034783 | LOC_Os04g43690 | Os04g0517300 | - | Detail |
| C1H4g19364 | 4:22,561,456-22,566,949 | + | C2H4g03267 | CX4g034365 | LOC_Os04g43700 | Os04g0517400 | - | Detail |
| C1H4g27983 | 4:22,570,379-22,571,379 | + | C2H4g18098 | CX4g036341 | LOC_Os04g43710 | Os04g0517500 | - | Detail |
| C1H4g02633 | 4:22,575,097-22,578,375 | - | C2H4g25250 | CX4g031725 | LOC_Os04g43730 | Os04g0517700 | - | Detail |
| C1H4g21239 | 4:22,584,597-22,588,168 | - | C2H4g18845 | CX4g032795 | LOC_Os04g43750 | Os04g0518000 | - | Detail |
| C1H4g17678 | 4:22,592,726-22,595,712 | - | C2H4g17450 | CX4g031424 | LOC_Os04g43760 | Os04g0518100 | - | Detail |
| C1H4g22637 | 4:22,601,648-22,604,291 | - | C2H4g28869 | CX4g031711 | LOC_Os04g43800 | Os04g0518400 | OsPAL6 | Detail |
| C1H4g07857 | 4:22,612,924-22,615,739 | - | C2H4g10523 | - | LOC_Os04g43824 | Os04g0518650 | - | Detail |
| C1H4g21094 | 4:22,624,582-22,628,348 | + | C2H4g12982 | CX4g035278 | LOC_Os04g43840 | Os04g0518800 | LABA1, LOGL6, OsLOGL6, An-2 | Detail |
| C1H4g30028 | 4:22,643,421-22,646,106 | + | C2H4g03913 | CX4g031681 | LOC_Os04g43910 | Os04g0519700 | ARF10, qSE4 | Detail |
| C1H4g09015 | 4:22,653,208-22,664,875 | - | C2H4g13261 | CX4g033896 | LOC_Os04g43916 | Os04g0519900 | - | Detail |
| C1H4g07978 | 4:22,665,750-22,670,307 | - | C2H4g00328 | CX4g033084 | LOC_Os04g43922 | Os04g0520000 | - | Detail |
| C1H4g29455 | 4:22,690,768-22,692,591 | + | C2H4g13133 | CX4g032514 | LOC_Os04g44060 | Os04g0521100 | OsPIP2;3 | Detail |
| C1H4g20974 | 4:22,693,342-22,693,635 | - | C2H4g21649 | - | - | - | - | Detail |
| C1H4g01962 | 4:22,693,922-22,694,944 | - | C2H4g30421 | - | - | - | - | Detail |
| C1H4g05956 | 4:22,697,067-22,697,330 | + | C2H4g17426 | CX4g034857 | LOC_Os04g44070 | Os04g0521300 | - | Detail |
| C1H4g04229 | 4:22,700,018-22,702,759 | + | C2H4g25112 | CX4g032134 | LOC_Os04g44090 | Os04g0521600 | - | Detail |
| C1H4g14520 | 4:22,706,368-22,709,546 | + | C2H4g19435 | CX4g031957 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| C1H4g13540 | 4:22,711,689-22,712,061 | + | C2H4g20077 | CX4g034351 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| C1H4g14130 | 4:22,727,345-22,728,093 | - | C2H4g17950 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005836 | 1:28,643,682-28,645,701 | - | C1H1g18764 | C2H1g11332 | LOC_Os01g55610 | Os01g0761500 | - | Detail |
| CX1g004097 | 1:28,653,343-28,653,627 | - | - | - | - | - | - | Detail |
| CX1g006499 | 1:28,654,947-28,656,716 | + | C1H1g08828 | C2H1g16819 | LOC_Os01g55690 | Os01g0762500 | GluA-1 | Detail |
| CX1g002406 | 1:28,660,723-28,661,699 | + | C1H1g25958 | C2H1g22476 | LOC_Os01g55640 | Os01g0761900 | - | Detail |
| CX1g004093 | 1:28,662,104-28,666,202 | - | C1H1g07257 | C2H1g16751 | LOC_Os01g55650 | Os01g0762000 | - | Detail |
| CX1g005220 | 1:28,673,700-28,675,474 | + | C1H1g08828 | C2H1g14975 | LOC_Os01g55690 | Os01g0762500 | GluA-1 | Detail |
| CX1g004620 | 1:28,682,102-28,682,404 | - | - | - | LOC_Os01g55720 | Os01g0762900 | - | Detail |
| CX1g006292 | 1:28,685,002-28,687,873 | - | C1H1g29162 | C2H1g29169 | LOC_Os01g55730 | Os01g0763000 | - | Detail |
| CX1g000567 | 1:28,688,192-28,692,611 | + | C1H1g04887 | C2H1g11671 | LOC_Os01g55740 | Os01g0763100 | - | Detail |
| CX1g004360 | 1:28,704,717-28,705,301 | - | - | - | - | - | - | Detail |
| CX1g004077 | 1:28,726,419-28,727,015 | - | C1H1g18251 | - | LOC_Os01g55770 | Os01g0763300 | - | Detail |
| CX1g006008 | 1:28,729,550-28,735,636 | + | C1H1g26251 | C2H1g05498 | LOC_Os01g55780 | Os01g0763600 | - | Detail |
| CX1g004690 | 1:28,736,318-28,742,147 | + | C1H1g12289 | C2H1g26721 | LOC_Os01g55799 | Os01g0763750 | - | Detail |
| CX1g005089 | 1:28,742,808-28,745,975 | - | C1H1g12916 | C2H1g06960 | LOC_Os01g55795 | Os01g0763900 | - | Detail |
| CX1g000089 | 1:28,747,235-28,750,775 | - | C1H1g27998 | C2H1g30425 | LOC_Os01g55830 | Os01g0764000 | - | Detail |
| CX1g002375 | 1:28,759,778-28,759,927 | + | - | - | - | - | - | Detail |
| CX1g005971 | 1:28,762,191-28,762,433 | + | C1H1g16908 | C2H1g18369 | LOC_Os01g55850 | Os01g0764200 | - | Detail |
| CX1g001722 | 1:28,764,212-28,767,197 | + | C1H1g00161 | C2H1g16154 | LOC_Os01g55860 | Os01g0764300 | - | Detail |
| CX1g003836 | 1:28,768,416-28,771,148 | - | C1H1g10691 | C2H1g19931 | LOC_Os01g55870 | Os01g0764400 | - | Detail |
| CX1g006203 | 1:28,786,984-28,791,095 | - | C1H1g19721 | C2H1g28294 | LOC_Os01g55880 | Os01g0764500 | - | Detail |