| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g02049 | 9:18,813,094-18,814,433 | - | - | - | - | - | - | Detail |
| C2H9g02251 | 9:18,815,851-18,826,481 | + | C1H9g30681 | CX9g057664 | LOC_Os09g38440 | Os09g0556700 | - | Detail |
| C2H9g19914 | 9:18,826,598-18,828,778 | - | C1H9g19768 | CX9g058159 | LOC_Os09g38450 | Os09g0556800 | - | Detail |
| C2H9g21049 | 9:18,832,567-18,834,307 | + | C1H9g29064 | CX9g054863 | LOC_Os09g38470 | Os09g0558600 | - | Detail |
| C2H9g08319 | 9:18,841,636-18,843,266 | + | C1H9g16942 | CX9g057682 | LOC_Os09g38490 | Os09g0558600 | - | Detail |
| C2H9g11110 | 9:18,847,404-18,848,254 | - | C1H9g30179 | CX9g057136 | LOC_Os09g38500 | Os09g0557400 | - | Detail |
| C2H9g27079 | 9:18,849,081-18,850,151 | - | C1H9g28316 | CX9g055644 | LOC_Os09g38510 | Os09g0557500 | - | Detail |
| C2H9g25699 | 9:18,852,559-18,855,228 | - | C1H9g26334 | CX9g055537 | LOC_Os09g38520 | Os09g0557700 | OsCYBDOMG1 | Detail |
| C2H9g21071 | 9:18,861,316-18,865,259 | + | C1H9g29950 | CX9g056733 | LOC_Os09g38530 | Os09g0557800 | - | Detail |
| C2H9g22541 | 9:18,866,465-18,867,065 | + | C1H9g31843 | CX9g056091 | LOC_Os09g38540 | Os09g0557900 | - | Detail |
| C2H9g09128 | 9:18,867,627-18,875,405 | - | C1H9g10993 | CX9g055672 | LOC_Os09g38550 | Os09g0558000 | - | Detail |
| C2H9g29195 | 9:18,875,356-18,876,431 | + | C1H9g23233 | CX9g055091 | LOC_Os09g38560 | Os09g0558100 | - | Detail |
| C2H9g24336 | 9:18,883,416-18,886,928 | + | C1H9g06849 | CX9g057634 | LOC_Os09g38570 | Os09g0558200 | - | Detail |
| C2H9g29603 | 9:18,888,298-18,892,870 | + | C1H9g11940 | CX9g057885 | LOC_Os09g38580 | Os09g0558300 | - | Detail |
| C2H9g25482 | 9:18,893,479-18,894,738 | + | C1H9g18523 | CX9g054863 | LOC_Os09g38600 | Os09g0558600 | - | Detail |
| C2H9g28361 | 9:18,895,780-18,897,602 | + | C1H9g23887 | CX9g054863 | LOC_Os09g38600 | Os09g0558600 | - | Detail |
| C2H9g08101 | 9:18,905,497-18,911,619 | - | C1H9g12892 | CX9g057540 | LOC_Os09g38620 | Os09g0558900 | - | Detail |
| C2H9g14835 | 9:18,918,631-18,919,830 | - | C1H9g13819 | CX9g057198 | LOC_Os09g38650 | Os09g0559200 | - | Detail |
| C2H9g07140 | 9:18,923,889-18,924,520 | + | - | - | - | - | - | Detail |
| C2H9g17578 | 9:18,924,546-18,925,099 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g051227 | 8:13,972,240-13,972,734 | + | - | - | - | - | - | Detail |
| CX8g053307 | 8:13,974,749-13,975,670 | + | C1H8g00025 | C2H3g30332 | - | Os08g0132700 | - | Detail |
| CX8g054300 | 8:13,979,398-13,981,018 | - | C1H8g19336 | C2H8g28308 | LOC_Os08g26820 | Os08g0356500 | - | Detail |
| CX8g054537 | 8:13,991,839-13,993,467 | - | C1H8g18441 | C2H8g20766 | LOC_Os08g26840 | Os08g0356700 | - | Detail |
| CX8g051633 | 8:14,007,821-14,009,525 | - | C1H8g18441 | C2H8g20766 | LOC_Os08g26850 | Os08g0356800 | - | Detail |
| CX8g052874 | 8:14,015,064-14,018,939 | - | C1H8g10235 | C2H8g22181 | LOC_Os08g26870 | Os08g0357000 | - | Detail |
| CX8g052610 | 8:14,029,941-14,030,132 | + | - | - | - | - | - | Detail |
| CX8g053523 | 8:14,050,003-14,051,283 | + | C1H8g07010 | C2H8g00680 | LOC_Os08g26880 | Os08g0357300 | bZIP65 | Detail |
| CX8g053242 | 8:14,097,165-14,099,060 | + | C1H8g30191 | C2H8g07337 | LOC_Os08g26990 | Os08g0358800 | OSRR13, OsRR13, Rra12, OsRR12, OsRRA12 | Detail |
| CX8g054278 | 8:14,106,654-14,110,357 | + | C1H8g02454 | C2H8g28936 | LOC_Os08g27010 | Os08g0359000 | - | Detail |
| CX8g051553 | 8:14,114,399-14,123,346 | - | C1H8g02680 | C2H8g09133 | LOC_Os08g27030 | Os08g0359100 | - | Detail |
| CX8g050425 | 8:14,124,803-14,125,196 | - | - | C2H8g00818 | - | Os08g0359200 | - | Detail |
| CX8g051132 | 8:14,127,168-14,132,497 | - | C1H8g11326 | C2H8g23684 | LOC_Os08g27050 | Os08g0359300 | - | Detail |
| CX8g052155 | 8:14,135,759-14,140,069 | - | C1H8g05675 | C2H8g05827 | LOC_Os08g27070 | Os08g0359500 | - | Detail |
| CX8g053905 | 8:14,153,379-14,153,636 | + | - | - | - | - | - | Detail |
| CX8g054446 | 8:14,155,073-14,155,282 | - | C1H8g17538 | - | LOC_Os09g26004 | - | - | Detail |
| CX8g050632 | 8:14,155,632-14,156,136 | + | - | - | - | - | - | Detail |
| CX8g054163 | 8:14,157,369-14,157,641 | + | C1H2g17263 | C2H2g18781 | LOC_Os02g47200 | Os02g0700400 | AOX1C, OsAOX1c | Detail |
| CX8g051696 | 8:14,165,928-14,166,401 | + | - | - | - | - | - | Detail |
| CX8g052785 | 8:14,167,065-14,171,061 | - | C1H8g22429 | C2H8g05453 | LOC_Os08g27090 | Os08g0359600 | - | Detail |