| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g08740 | 4:5,837,219-5,840,950 | + | C1H4g27268 | CX4g033727 | LOC_Os04g11760 | Os04g0193950 | - | Detail |
| C2H4g24115 | 4:5,863,103-5,863,795 | + | C1H4g00127 | CX4g034119 | - | - | - | Detail |
| C2H4g01433 | 4:5,877,746-5,884,336 | - | C1H4g11202 | CX4g032821 | LOC_Os04g11820 | Os04g0194500 | - | Detail |
| C2H4g23993 | 4:5,907,269-5,914,707 | + | C1H4g19431 | CX4g034386 | LOC_Os04g11880 | Os04g0195000 | - | Detail |
| C2H4g11331 | 4:5,933,106-5,934,673 | + | C1H4g25694 | CX4g035968 | LOC_Os08g24980 | - | - | Detail |
| C2H4g08911 | 4:5,953,713-5,956,448 | + | C1H4g19937 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| C2H4g17260 | 4:5,977,877-5,980,574 | - | C1H4g07183 | CX4g034245 | LOC_Os04g12010 | Os04g0196600 | - | Detail |
| C2H4g14785 | 4:6,313,890-6,316,207 | - | C1H4g14978 | CX4g034359 | LOC_Os04g12390 | Os04g0330200 | - | Detail |
| C2H4g03396 | 4:6,335,305-6,336,315 | + | - | CX4g032415 | LOC_Os04g12430 | Os04g0200700 | - | Detail |
| C2H4g26962 | 4:6,336,510-6,342,139 | + | - | CX4g032415 | LOC_Os04g12430 | - | - | Detail |
| C2H4g06118 | 4:6,346,027-6,353,840 | - | - | CX4g031446 | - | - | - | Detail |
| C2H4g10504 | 4:6,362,734-6,369,160 | - | C1H4g16105 | CX4g034375 | LOC_Os04g12480 | Os04g0201200 | - | Detail |
| C2H4g26946 | 4:6,396,910-6,405,329 | - | C1H4g17374 | CX4g036106 | LOC_Os04g12499 | Os04g0201500 | OsAAT30 | Detail |
| C2H4g03852 | 4:6,416,375-6,420,043 | - | C1H4g14971 | CX4g034779 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| C2H4g15231 | 4:6,427,164-6,428,727 | + | - | - | - | - | - | Detail |
| C2H4g12193 | 4:6,428,170-6,430,605 | - | C1H4g17048 | CX4g034921 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| C2H4g26627 | 4:6,448,193-6,448,576 | - | - | - | - | Os04g0617200 | - | Detail |
| C2H4g18743 | 4:6,463,388-6,466,416 | - | C1H4g18742 | CX4g032311 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| C2H4g09802 | 4:6,477,598-6,478,724 | + | C1H4g19896 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C2H4g10760 | 4:6,479,684-6,480,995 | + | C1H4g09867 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001046 | 1:28,476,915-28,477,354 | + | - | - | - | Os01g0758350 | - | Detail |
| CX1g005462 | 1:28,486,427-28,491,767 | - | C1H1g12904 | - | LOC_Os01g55360 | Os01g0758400 | - | Detail |
| CX1g002956 | 1:28,499,061-28,499,642 | - | C1H1g25773 | - | LOC_Os01g55370 | Os01g0758500 | - | Detail |
| CX1g004565 | 1:28,532,699-28,534,938 | + | C1H1g00696 | C2H1g29396 | LOC_Os01g55410 | Os01g0758900 | - | Detail |
| CX1g005946 | 1:28,541,250-28,542,148 | + | C1H1g24935 | C2H1g14233 | LOC_Os01g55420 | Os01g0759000 | - | Detail |
| CX1g002012 | 1:28,542,995-28,545,231 | - | C1H1g27055 | C2H1g23330 | LOC_Os01g55430 | Os01g0759100 | - | Detail |
| CX1g006544 | 1:28,548,743-28,549,627 | + | C1H1g18342 | C2H1g17948 | - | Os01g0859500 | OsLG2, rLG2 | Detail |
| CX1g004205 | 1:28,554,383-28,555,825 | - | C1H1g18869 | C2H1g19008 | LOC_Os01g55440 | Os01g0759200 | OsCIPK30 | Detail |
| CX1g003443 | 1:28,560,415-28,564,116 | - | C1H1g03820 | C2H1g19008 | LOC_Os01g55450 | Os01g0759400 | - | Detail |
| CX1g002187 | 1:28,572,407-28,576,612 | + | C1H1g27932 | C2H1g00211 | LOC_Os01g55490 | Os01g0759700 | - | Detail |
| CX1g003122 | 1:28,579,358-28,583,032 | + | C1H1g25715 | C2H1g11945 | LOC_Os01g55500 | Os01g0759900 | - | Detail |
| CX1g005270 | 1:28,589,006-28,591,132 | + | C1H1g04922 | C2H1g24110 | LOC_Os01g55520 | Os01g0760300 | OsRopGEF8 | Detail |
| CX1g005505 | 1:28,593,864-28,596,872 | - | C1H1g22131 | C2H1g28840 | LOC_Os01g55530 | Os01g0760400 | - | Detail |
| CX1g003690 | 1:28,600,775-28,605,386 | - | C1H1g24669 | C2H1g30012 | LOC_Os01g55540 | Os01g0760600 | - | Detail |
| CX1g007126 | 1:28,606,993-28,610,388 | - | C1H1g26811 | C2H1g07156 | LOC_Os01g55549 | Os01g0760800 | OsGL2 | Detail |
| CX1g001192 | 1:28,611,730-28,614,078 | - | C1H1g11405 | C2H1g22947 | LOC_Os01g55560 | Os01g0760900 | - | Detail |
| CX1g003567 | 1:28,615,526-28,617,139 | + | C1H1g01758 | C2H1g14280 | LOC_Os01g55570 | Os01g0761000 | - | Detail |
| CX1g001741 | 1:28,617,813-28,623,070 | - | C1H1g03450 | C2H1g02714 | LOC_Os01g55580 | Os01g0761100 | - | Detail |
| CX1g001107 | 1:28,631,406-28,637,710 | + | C1H1g17949 | C2H1g29776 | LOC_Os01g55590 | Os01g0761300 | - | Detail |
| CX1g004639 | 1:28,638,114-28,640,294 | - | C1H1g13293 | C2H1g30373 | LOC_Os01g55600 | Os01g0761400 | - | Detail |