| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g26497 | 4:3,214,424-3,216,214 | - | C2H4g08785 | CX4g033688 | LOC_Os04g08290 | Os04g0165200 | ART2 | Detail |
| C1H4g15929 | 4:3,222,135-3,223,120 | + | - | CX4g033043 | LOC_Os04g08310 | Os04g0165300 | - | Detail |
| C1H4g20789 | 4:3,226,239-3,228,095 | - | C2H4g02342 | CX4g035325 | LOC_Os04g08320 | Os04g0165400 | - | Detail |
| C1H4g12785 | 4:3,230,389-3,230,700 | - | C2H4g19422 | CX4g035853 | LOC_Os04g08330 | Os04g0165500 | - | Detail |
| C1H4g31381 | 4:3,245,804-3,247,931 | + | C2H4g06874 | CX4g036241 | LOC_Os04g08340 | Os04g0165600 | - | Detail |
| C1H4g30280 | 4:3,250,393-3,254,434 | - | C2H4g04495 | CX4g034083 | LOC_Os04g08350 | Os04g0165700 | - | Detail |
| C1H4g18120 | 4:3,262,917-3,265,964 | - | C2H4g24204 | CX4g034989 | LOC_Os04g08390 | Os04g0166000 | - | Detail |
| C1H4g16596 | 4:3,291,349-3,296,428 | - | C2H4g25306 | CX4g036344 | LOC_Os04g08410 | Os04g0166400 | - | Detail |
| C1H4g13488 | 4:3,322,176-3,326,018 | + | C2H4g16904 | CX4g036063 | LOC_Os04g08450 | Os04g0166600 | OsSFL1 | Detail |
| C1H4g11999 | 4:3,334,056-3,336,300 | + | C2H4g26054 | CX4g033810 | LOC_Os04g08460 | - | - | Detail |
| C1H4g21471 | 4:3,370,486-3,373,209 | - | C2H4g21134 | CX4g033225 | LOC_Os04g08550 | Os04g0167800 | - | Detail |
| C1H4g06121 | 4:3,377,126-3,378,118 | - | C2H4g04423 | CX4g034291 | - | Os04g0167875 | - | Detail |
| C1H4g27562 | 4:3,381,940-3,384,383 | - | C2H4g12568 | CX4g034291 | - | Os04g0167900 | - | Detail |
| C1H4g05004 | 4:3,385,590-3,386,226 | - | C2H4g02316 | CX4g032052 | LOC_Os04g08570 | Os04g0168000 | - | Detail |
| C1H4g17104 | 4:3,407,004-3,407,471 | - | - | CX4g034069 | LOC_Os04g08600 | Os04g0168100 | SRO | Detail |
| C1H4g08725 | 4:3,467,959-3,468,944 | - | - | CX4g036254 | LOC_Os04g08730 | - | - | Detail |
| C1H4g12046 | 4:3,475,828-3,479,747 | + | C2H4g13508 | CX4g033888 | LOC_Os04g08740 | Os04g0169100 | ETR2, OsETR2, OS-ETR2, etr2, OsPK1, PK1, ERL1, OsERL1, OsERS3 | Detail |
| C1H4g26213 | 4:3,498,442-3,500,124 | - | C2H4g19627 | CX4g036277 | LOC_Os04g08764 | Os04g0169500 | - | Detail |
| C1H4g05807 | 4:3,567,302-3,569,530 | + | C2H4g04047 | CX4g034654 | LOC_Os04g08824 | Os04g0171600 | - | Detail |
| C1H4g06403 | 4:3,573,267-3,577,599 | + | C2H4g27784 | CX4g031382 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001046 | 1:28,476,915-28,477,354 | + | - | - | - | Os01g0758350 | - | Detail |
| CX1g005462 | 1:28,486,427-28,491,767 | - | C1H1g12904 | - | LOC_Os01g55360 | Os01g0758400 | - | Detail |
| CX1g002956 | 1:28,499,061-28,499,642 | - | C1H1g25773 | - | LOC_Os01g55370 | Os01g0758500 | - | Detail |
| CX1g004565 | 1:28,532,699-28,534,938 | + | C1H1g00696 | C2H1g29396 | LOC_Os01g55410 | Os01g0758900 | - | Detail |
| CX1g005946 | 1:28,541,250-28,542,148 | + | C1H1g24935 | C2H1g14233 | LOC_Os01g55420 | Os01g0759000 | - | Detail |
| CX1g002012 | 1:28,542,995-28,545,231 | - | C1H1g27055 | C2H1g23330 | LOC_Os01g55430 | Os01g0759100 | - | Detail |
| CX1g006544 | 1:28,548,743-28,549,627 | + | C1H1g18342 | C2H1g17948 | - | Os01g0859500 | OsLG2, rLG2 | Detail |
| CX1g004205 | 1:28,554,383-28,555,825 | - | C1H1g18869 | C2H1g19008 | LOC_Os01g55440 | Os01g0759200 | OsCIPK30 | Detail |
| CX1g003443 | 1:28,560,415-28,564,116 | - | C1H1g03820 | C2H1g19008 | LOC_Os01g55450 | Os01g0759400 | - | Detail |
| CX1g002187 | 1:28,572,407-28,576,612 | + | C1H1g27932 | C2H1g00211 | LOC_Os01g55490 | Os01g0759700 | - | Detail |
| CX1g003122 | 1:28,579,358-28,583,032 | + | C1H1g25715 | C2H1g11945 | LOC_Os01g55500 | Os01g0759900 | - | Detail |
| CX1g005270 | 1:28,589,006-28,591,132 | + | C1H1g04922 | C2H1g24110 | LOC_Os01g55520 | Os01g0760300 | OsRopGEF8 | Detail |
| CX1g005505 | 1:28,593,864-28,596,872 | - | C1H1g22131 | C2H1g28840 | LOC_Os01g55530 | Os01g0760400 | - | Detail |
| CX1g003690 | 1:28,600,775-28,605,386 | - | C1H1g24669 | C2H1g30012 | LOC_Os01g55540 | Os01g0760600 | - | Detail |
| CX1g007126 | 1:28,606,993-28,610,388 | - | C1H1g26811 | C2H1g07156 | LOC_Os01g55549 | Os01g0760800 | OsGL2 | Detail |
| CX1g001192 | 1:28,611,730-28,614,078 | - | C1H1g11405 | C2H1g22947 | LOC_Os01g55560 | Os01g0760900 | - | Detail |
| CX1g003567 | 1:28,615,526-28,617,139 | + | C1H1g01758 | C2H1g14280 | LOC_Os01g55570 | Os01g0761000 | - | Detail |
| CX1g001741 | 1:28,617,813-28,623,070 | - | C1H1g03450 | C2H1g02714 | LOC_Os01g55580 | Os01g0761100 | - | Detail |
| CX1g001107 | 1:28,631,406-28,637,710 | + | C1H1g17949 | C2H1g29776 | LOC_Os01g55590 | Os01g0761300 | - | Detail |
| CX1g004639 | 1:28,638,114-28,640,294 | - | C1H1g13293 | C2H1g30373 | LOC_Os01g55600 | Os01g0761400 | - | Detail |