| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g05854 | 2:24,113,140-24,117,694 | - | C2H2g09002 | CX2g023178 | LOC_Os02g43010 | Os02g0644000 | OsVPE3, REP-2 | Detail |
| C1H2g12524 | 2:24,118,233-24,122,633 | + | C2H2g00079 | CX2g022755 | LOC_Os02g43020 | Os02g0644100 | - | Detail |
| C1H2g05443 | 2:24,131,693-24,135,108 | - | C2H2g15622 | CX2g021698 | LOC_Os02g43040 | Os02g0644500 | OsATG13a | Detail |
| C1H2g08836 | 2:24,140,556-24,141,254 | - | C2H2g02399 | CX2g021900 | LOC_Os02g43120 | Os02g0645000 | - | Detail |
| C1H2g01413 | 2:24,145,393-24,151,404 | - | C2H2g04299 | CX2g023325 | LOC_Os02g43050 | Os02g0644400 | - | Detail |
| C1H2g28893 | 2:24,171,407-24,172,099 | - | C2H2g07056 | CX2g023648 | LOC_Os02g43120 | Os02g0645000 | - | Detail |
| C1H2g14943 | 2:24,174,378-24,180,595 | - | C2H2g08300 | CX2g019755 | LOC_Os02g43130 | Os02g0645100 | - | Detail |
| C1H2g17222 | 2:24,195,210-24,196,754 | + | C2H2g12947 | CX2g024545 | LOC_Os02g43150 | Os02g0645600 | - | Detail |
| C1H2g19085 | 2:24,230,972-24,232,280 | + | C2H2g19622 | CX2g024814 | LOC_Os02g43170 | Os02g0646200 | - | Detail |
| C1H2g22786 | 2:24,234,363-24,237,015 | + | C2H2g11300 | CX2g024271 | LOC_Os02g43180 | Os02g0646400 | - | Detail |
| C1H2g07582 | 2:24,238,018-24,244,395 | - | C2H2g09061 | CX2g020293 | LOC_Os02g43194 | Os02g0646500 | - | Detail |
| C1H2g05654 | 2:24,264,441-24,269,829 | + | C2H2g12985 | CX2g024426 | LOC_Os02g43280 | Os02g0647900 | - | Detail |
| C1H2g13691 | 2:24,274,583-24,275,783 | - | C2H2g29445 | CX2g021973 | LOC_Os02g43290 | Os02g0648100 | - | Detail |
| C1H2g15207 | 2:24,281,913-24,285,136 | - | C2H2g03827 | CX2g020713 | LOC_Os02g43300 | Os02g0648300 | - | Detail |
| C1H2g10382 | 2:24,285,889-24,286,299 | - | C2H2g03827 | CX2g020713 | LOC_Os02g43300 | Os02g0104500 | - | Detail |
| C1H2g25916 | 2:24,322,971-24,323,840 | + | C2H2g11895 | CX2g019169 | LOC_Os02g43330 | Os02g0649300 | HOX24, Oshox24, OsHox24, OsSLI1 | Detail |
| C1H2g29202 | 2:24,328,411-24,332,712 | - | C2H2g11536 | CX2g021953 | LOC_Os02g43340 | Os02g0649400 | - | Detail |
| C1H2g22654 | 2:24,337,420-24,343,643 | + | C2H2g04607 | CX2g021451 | LOC_Os02g43350 | Os02g0649700 | - | Detail |
| C1H2g29127 | 2:24,344,406-24,345,088 | - | C2H2g04813 | CX2g024526 | LOC_Os02g43360 | Os02g0649800 | - | Detail |
| C1H2g17207 | 2:24,350,005-24,354,750 | - | C2H2g23002 | CX2g022915 | LOC_Os02g43370 | Os02g0649900 | YSL2, OsYSL2, Os-YSL2, OsYs6 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g051143 | 8:11,398,742-11,402,572 | + | C1H8g00310 | C2H8g03316 | LOC_Os08g23150 | Os08g0320400 | - | Detail |
| CX8g051901 | 8:11,407,508-11,411,017 | + | C1H1g06007 | C2H8g25361 | LOC_Os08g23160 | Os08g0320800 | - | Detail |
| CX8g051510 | 8:11,412,079-11,412,513 | + | - | - | LOC_Os08g23170 | Os08g0320900 | - | Detail |
| CX8g053704 | 8:11,420,617-11,423,316 | - | C1H8g24713 | C2H8g04393 | LOC_Os08g23180 | Os08g0321000 | - | Detail |
| CX8g052332 | 8:11,437,239-11,437,790 | - | - | - | - | - | - | Detail |
| CX8g053349 | 8:11,458,287-11,459,594 | + | - | - | - | - | - | Detail |
| CX8g053493 | 8:11,477,272-11,479,765 | + | C1H8g10589 | C2H8g02929 | LOC_Os08g23290 | Os08g0322500 | - | Detail |
| CX8g054004 | 8:11,495,761-11,497,969 | - | C1H8g22815 | C2H8g01188 | LOC_Os08g23320 | Os08g0322600 | - | Detail |
| CX8g051481 | 8:11,508,751-11,518,132 | - | C1H8g13414 | C2H8g19001 | LOC_Os08g23360 | Os08g0323000 | - | Detail |
| CX8g053037 | 8:11,537,264-11,537,878 | + | - | - | - | - | - | Detail |
| CX8g053910 | 8:11,541,087-11,551,658 | - | C1H8g27554 | C2H8g03076 | LOC_Os08g23430 | Os08g0323600 | - | Detail |
| CX8g054155 | 8:11,553,371-11,553,727 | + | - | - | - | - | - | Detail |
| CX8g053168 | 8:11,558,333-11,558,671 | + | - | - | - | - | - | Detail |
| CX8g054561 | 8:11,560,220-11,568,609 | - | C1H8g12452 | C2H8g26455 | LOC_Os08g23440 | Os08g0323700 | Os CCC1, OsCCC1, OsLAT9 | Detail |
| CX8g052250 | 8:11,568,810-11,569,064 | + | - | - | - | - | - | Detail |
| CX8g052499 | 8:11,582,448-11,583,053 | + | - | - | LOC_Os08g23460 | Os08g0324200 | - | Detail |
| CX8g054407 | 8:11,584,513-11,587,200 | - | C1H8g23158 | C2H8g11037 | LOC_Os08g23470 | Os08g0324300 | - | Detail |
| CX8g053914 | 8:11,594,249-11,601,574 | - | C1H8g23158 | C2H8g19686 | LOC_Os08g23570 | Os08g0325134 | - | Detail |
| CX8g052735 | 8:11,607,405-11,607,770 | - | - | - | - | - | - | Detail |
| CX8g054798 | 8:11,627,650-11,630,288 | - | C1H8g13175 | C2H8g05859 | LOC_Os06g36530 | Os08g0172300 | - | Detail |