| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g07144 | 4:22,787,270-22,791,227 | - | C1H4g10299 | CX4g033080 | LOC_Os04g44580 | Os04g0528000 | - | Detail |
| C2H4g11856 | 4:22,792,855-22,796,915 | + | C1H4g13862 | CX4g032855 | LOC_Os04g44590 | Os04g0528100 | - | Detail |
| C2H4g12294 | 4:22,797,482-22,797,916 | + | C1H4g30731 | CX4g032636 | LOC_Os04g44600 | Os04g0528200 | - | Detail |
| C2H4g04746 | 4:22,801,700-22,807,426 | + | C1H4g11671 | CX4g035605 | LOC_Os04g44610 | Os04g0528300 | - | Detail |
| C2H4g12664 | 4:22,808,303-22,810,480 | - | C1H4g28473 | CX4g032007 | LOC_Os04g44620 | Os04g0528400 | - | Detail |
| C2H4g21654 | 4:22,812,154-22,814,232 | - | C1H4g13058 | CX4g034906 | LOC_Os04g44640 | Os04g0528600 | - | Detail |
| C2H4g19424 | 4:22,820,242-22,820,703 | - | - | CX4g032364 | LOC_Os04g44650 | Os04g0528800 | - | Detail |
| C2H4g27437 | 4:22,822,598-22,823,998 | - | C1H4g06177 | CX4g032964 | LOC_Os04g44670 | Os04g0529100 | - | Detail |
| C2H4g24717 | 4:22,857,656-22,863,637 | + | C1H4g05544 | CX4g033020 | LOC_Os04g44700 | Os04g0529400 | - | Detail |
| C2H4g12368 | 4:22,865,964-22,875,118 | + | C1H4g07606 | CX4g032261 | LOC_Os04g44710 | Os04g0529500 | - | Detail |
| C2H4g07334 | 4:22,879,225-22,881,660 | + | C1H4g02607 | CX4g031418 | LOC_Os04g44730 | Os04g0529600 | - | Detail |
| C2H4g10598 | 4:22,882,901-22,884,391 | + | - | CX4g032069 | LOC_Os04g44740 | Os04g0529700 | - | Detail |
| C2H4g11960 | 4:22,884,777-22,887,363 | - | C1H4g28539 | CX4g033796 | LOC_Os04g44750 | Os04g0529800 | - | Detail |
| C2H4g10899 | 4:22,888,603-22,889,350 | - | C1H4g08306 | CX4g033796 | LOC_Os04g44760 | Os04g0529800 | - | Detail |
| C2H4g21087 | 4:22,890,277-22,892,513 | - | C1H4g22519 | CX4g035211 | LOC_Os04g44770 | Os04g0530000 | - | Detail |
| C2H4g08834 | 4:22,895,144-22,895,860 | + | - | - | - | - | - | Detail |
| C2H4g09105 | 4:22,896,880-22,899,305 | + | C1H4g20687 | CX4g034316 | LOC_Os04g44780 | Os04g0530100 | - | Detail |
| C2H4g16563 | 4:22,901,701-22,905,615 | - | C1H4g03646 | CX4g035100 | LOC_Os04g44800 | Os04g0530300 | - | Detail |
| C2H4g24018 | 4:22,905,975-22,908,799 | + | C1H4g09494 | CX4g034443 | LOC_Os04g44810 | Os04g0530400 | - | Detail |
| C2H4g02165 | 4:22,909,456-22,910,217 | - | - | CX4g035000 | LOC_Os04g44820 | Os04g0530500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003778 | 1:28,332,108-28,332,320 | - | - | - | - | - | - | Detail |
| CX1g005575 | 1:28,333,146-28,335,655 | - | C1H1g10544 | C2H1g26286 | LOC_Os01g55120 | Os01g0756000 | - | Detail |
| CX1g006243 | 1:28,343,333-28,345,424 | + | C1H1g21888 | C2H1g27103 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| CX1g001072 | 1:28,347,614-28,348,162 | - | - | - | LOC_Os01g55160 | Os01g0756300 | - | Detail |
| CX1g003911 | 1:28,353,190-28,363,008 | - | C1H1g02918 | C2H1g30168 | LOC_Os01g55170 | Os01g0756400 | - | Detail |
| CX1g003221 | 1:28,368,555-28,372,068 | + | C1H1g08295 | C2H1g05126 | LOC_Os01g55190 | Os01g0531400 | - | Detail |
| CX1g002081 | 1:28,381,875-28,384,168 | + | C1H1g21813 | C2H1g22597 | LOC_Os01g55200 | Os01g0756700 | KAT1, OsKAT1 | Detail |
| CX1g004631 | 1:28,387,270-28,387,656 | + | - | - | - | Os01g0756900 | - | Detail |
| CX1g004140 | 1:28,402,436-28,404,204 | + | C1H1g15032 | C2H1g23299 | LOC_Os01g55240 | Os01g0757200 | GA2OX3, OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3 | Detail |
| CX1g001582 | 1:28,406,011-28,406,184 | + | - | - | - | - | - | Detail |
| CX1g001542 | 1:28,418,785-28,422,523 | + | C1H1g13228 | C2H1g18562 | LOC_Os01g55260 | Os01g0757400 | - | Detail |
| CX1g000631 | 1:28,423,175-28,425,965 | - | C1H1g20677 | C2H1g15915 | LOC_Os01g55270 | Os01g0757500 | - | Detail |
| CX1g004257 | 1:28,432,705-28,434,020 | - | C1H1g01435 | C2H1g24400 | LOC_Os01g55280 | Os01g0757600 | - | Detail |
| CX1g006495 | 1:28,442,928-28,446,633 | - | C1H1g01756 | C2H1g24899 | LOC_Os01g55290 | Os01g0757700 | - | Detail |
| CX1g003762 | 1:28,446,795-28,451,730 | + | C1H1g09106 | C2H1g22215 | LOC_Os01g55300 | Os01g0757800 | - | Detail |
| CX1g005426 | 1:28,452,490-28,455,625 | - | C1H1g06019 | C2H1g22679 | LOC_Os01g55310 | Os01g0757900 | - | Detail |
| CX1g002989 | 1:28,456,897-28,457,573 | - | C1H1g04207 | C2H1g13025 | LOC_Os01g55320 | Os01g0758000 | - | Detail |
| CX1g000088 | 1:28,458,537-28,458,692 | + | - | - | LOC_Os01g54280 | Os01g0930300 | - | Detail |
| CX1g007259 | 1:28,469,629-28,469,868 | - | - | - | - | - | - | Detail |
| CX1g006023 | 1:28,476,102-28,481,422 | - | C1H1g13262 | C2H1g30086 | LOC_Os01g55350 | Os01g0758300 | - | Detail |