| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16257 | 3:32,834,983-32,842,453 | + | C1H3g30692 | CX3g028093 | LOC_Os03g63940 | Os03g0856400 | - | Detail |
| C2H3g23494 | 3:32,842,821-32,844,831 | + | C1H3g30692 | CX3g031181 | LOC_Os03g63950 | Os03g0856500 | - | Detail |
| C2H3g11890 | 3:32,871,730-32,874,342 | - | C1H3g20639 | CX3g029621 | LOC_Os03g64020 | Os03g0857400 | - | Detail |
| C2H3g15877 | 3:32,875,988-32,877,519 | - | C1H3g22114 | CX3g025931 | LOC_Os03g64030 | Os03g0857500 | - | Detail |
| C2H3g02920 | 3:32,894,691-32,905,105 | - | C1H3g29403 | CX3g027831 | LOC_Os03g64080 | Os03g0858100 | - | Detail |
| C2H3g25733 | 3:32,906,714-32,907,133 | - | C1H3g01357 | CX3g026648 | LOC_Os03g64100 | Os03g0858200 | - | Detail |
| C2H3g02150 | 3:32,910,952-32,915,228 | + | C1H3g08857 | CX3g030847 | LOC_Os03g64110 | Os03g0858400 | - | Detail |
| C2H3g17790 | 3:32,924,076-32,925,530 | - | C1H3g16247 | CX3g029022 | LOC_Os03g64140 | Os03g0858700 | - | Detail |
| C2H3g03018 | 3:32,933,348-32,934,793 | - | C1H3g22208 | CX3g028143 | LOC_Os03g64150 | Os03g0858800 | BIRG1 | Detail |
| C2H3g13548 | 3:32,939,530-32,940,363 | - | C1H3g22606 | CX3g029038 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| C2H3g20836 | 3:32,942,568-32,942,965 | - | C1H3g08104 | CX3g029038 | LOC_Os03g64170 | Os03g0859100 | - | Detail |
| C2H3g16125 | 3:32,954,423-32,960,219 | - | C1H3g07086 | CX3g031056 | LOC_Os03g64190 | Os03g0859300 | - | Detail |
| C2H3g24116 | 3:32,962,317-32,967,903 | - | C1H3g08038 | CX3g029460 | LOC_Os03g64200 | Os03g0859500 | - | Detail |
| C2H3g24534 | 3:32,970,795-32,974,275 | - | C1H3g08107 | CX3g028741 | LOC_Os03g64210 | Os03g0859600 | - | Detail |
| C2H3g16421 | 3:32,976,482-32,979,147 | - | C1H3g16052 | CX3g027116 | LOC_Os03g64219 | Os03g0859800 | - | Detail |
| C2H3g04803 | 3:32,983,578-32,986,429 | + | C1H3g15087 | CX3g027684 | LOC_Os03g64230 | Os03g0859900 | - | Detail |
| C2H3g08868 | 3:32,986,887-32,991,991 | + | C1H3g16330 | CX3g030691 | LOC_Os03g64250 | Os03g0860000 | - | Detail |
| C2H3g04480 | 3:32,999,958-33,017,373 | - | C1H3g08606 | CX3g027910 | LOC_Os03g64290 | Os03g0860700 | - | Detail |
| C2H3g22239 | 3:33,020,791-33,027,054 | + | C1H3g27781 | CX3g029996 | LOC_Os03g64300 | Os03g0860900 | - | Detail |
| C2H3g11459 | 3:33,028,107-33,039,116 | + | C1H3g04412 | CX3g027284 | LOC_Os03g64320 | Os03g0861100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003778 | 1:28,332,108-28,332,320 | - | - | - | - | - | - | Detail |
| CX1g005575 | 1:28,333,146-28,335,655 | - | C1H1g10544 | C2H1g26286 | LOC_Os01g55120 | Os01g0756000 | - | Detail |
| CX1g006243 | 1:28,343,333-28,345,424 | + | C1H1g21888 | C2H1g27103 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| CX1g001072 | 1:28,347,614-28,348,162 | - | - | - | LOC_Os01g55160 | Os01g0756300 | - | Detail |
| CX1g003911 | 1:28,353,190-28,363,008 | - | C1H1g02918 | C2H1g30168 | LOC_Os01g55170 | Os01g0756400 | - | Detail |
| CX1g003221 | 1:28,368,555-28,372,068 | + | C1H1g08295 | C2H1g05126 | LOC_Os01g55190 | Os01g0531400 | - | Detail |
| CX1g002081 | 1:28,381,875-28,384,168 | + | C1H1g21813 | C2H1g22597 | LOC_Os01g55200 | Os01g0756700 | KAT1, OsKAT1 | Detail |
| CX1g004631 | 1:28,387,270-28,387,656 | + | - | - | - | Os01g0756900 | - | Detail |
| CX1g004140 | 1:28,402,436-28,404,204 | + | C1H1g15032 | C2H1g23299 | LOC_Os01g55240 | Os01g0757200 | GA2OX3, OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3 | Detail |
| CX1g001582 | 1:28,406,011-28,406,184 | + | - | - | - | - | - | Detail |
| CX1g001542 | 1:28,418,785-28,422,523 | + | C1H1g13228 | C2H1g18562 | LOC_Os01g55260 | Os01g0757400 | - | Detail |
| CX1g000631 | 1:28,423,175-28,425,965 | - | C1H1g20677 | C2H1g15915 | LOC_Os01g55270 | Os01g0757500 | - | Detail |
| CX1g004257 | 1:28,432,705-28,434,020 | - | C1H1g01435 | C2H1g24400 | LOC_Os01g55280 | Os01g0757600 | - | Detail |
| CX1g006495 | 1:28,442,928-28,446,633 | - | C1H1g01756 | C2H1g24899 | LOC_Os01g55290 | Os01g0757700 | - | Detail |
| CX1g003762 | 1:28,446,795-28,451,730 | + | C1H1g09106 | C2H1g22215 | LOC_Os01g55300 | Os01g0757800 | - | Detail |
| CX1g005426 | 1:28,452,490-28,455,625 | - | C1H1g06019 | C2H1g22679 | LOC_Os01g55310 | Os01g0757900 | - | Detail |
| CX1g002989 | 1:28,456,897-28,457,573 | - | C1H1g04207 | C2H1g13025 | LOC_Os01g55320 | Os01g0758000 | - | Detail |
| CX1g000088 | 1:28,458,537-28,458,692 | + | - | - | LOC_Os01g54280 | Os01g0930300 | - | Detail |
| CX1g007259 | 1:28,469,629-28,469,868 | - | - | - | - | - | - | Detail |
| CX1g006023 | 1:28,476,102-28,481,422 | - | C1H1g13262 | C2H1g30086 | LOC_Os01g55350 | Os01g0758300 | - | Detail |