| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g13237 | 6:4,873,652-4,877,282 | - | C1H6g15327 | CX6g041644 | LOC_Os06g11170 | Os06g0215200 | - | Detail |
| C2H6g12848 | 6:4,878,201-4,886,148 | - | C1H6g11886 | CX6g041530 | LOC_Os06g11180 | Os06g0215300 | - | Detail |
| C2H6g10401 | 6:4,886,748-4,893,101 | - | C1H6g04214 | CX6g041872 | LOC_Os06g11190 | Os06g0215400 | - | Detail |
| C2H6g26207 | 6:4,895,265-4,895,915 | - | C1H6g07641 | - | LOC_Os06g11200 | Os06g0215500 | - | Detail |
| C2H6g08264 | 6:4,904,842-4,906,304 | - | C1H6g30460 | - | LOC_Os06g11210 | Os06g0215600 | - | Detail |
| C2H6g15879 | 6:4,912,455-4,913,731 | - | C1H6g06300 | - | LOC_Os06g11240 | Os06g0215900 | - | Detail |
| C2H6g01602 | 6:4,915,676-4,917,220 | - | C1H6g29115 | - | LOC_Os06g11260 | Os06g0216200 | - | Detail |
| C2H6g09645 | 6:4,922,139-4,922,444 | - | C1H6g06799 | CX10g008171 | LOC_Os06g11270 | Os06g0216100 | - | Detail |
| C2H6g30314 | 6:4,922,401-4,923,521 | + | - | - | - | - | - | Detail |
| C2H6g19562 | 6:4,922,501-4,923,004 | - | C1H6g06799 | CX6g044238 | LOC_Os06g11270 | Os06g0216100 | - | Detail |
| C2H6g04716 | 6:4,923,116-4,927,183 | - | C1H6g23925 | CX6g045235 | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C2H6g11179 | 6:4,933,639-4,934,894 | - | C1H6g31851 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C2H6g01468 | 6:4,937,947-4,939,446 | - | C1H6g15300 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C2H6g04782 | 6:4,945,889-4,947,405 | - | C1H6g13881 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C2H6g03509 | 6:4,949,359-4,953,012 | - | C1H6g22566 | CX6g044875 | LOC_Os06g11300 | Os06g0216400 | - | Detail |
| C2H6g21771 | 6:4,961,874-4,962,762 | - | C1H6g13647 | CX6g041766 | LOC_Os06g11310 | Os06g0216700 | - | Detail |
| C2H6g18048 | 6:4,965,254-4,970,257 | - | C1H6g11372 | CX6g045112 | LOC_Os06g11320 | Os06g0216800 | - | Detail |
| C2H6g03789 | 6:4,981,955-4,996,442 | - | C1H6g00888 | CX6g041344 | LOC_Os06g11330 | Os06g0217300 | OsMADS55 | Detail |
| C2H6g23128 | 6:5,008,012-5,011,177 | - | C1H6g18685 | CX6g045941 | LOC_Os06g11370 | Os06g0217500 | - | Detail |
| C2H6g26845 | 6:5,013,060-5,029,175 | - | C1H6g24377 | CX6g045380 | LOC_Os06g11380 | Os06g0217600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003778 | 1:28,332,108-28,332,320 | - | - | - | - | - | - | Detail |
| CX1g005575 | 1:28,333,146-28,335,655 | - | C1H1g10544 | C2H1g26286 | LOC_Os01g55120 | Os01g0756000 | - | Detail |
| CX1g006243 | 1:28,343,333-28,345,424 | + | C1H1g21888 | C2H1g27103 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| CX1g001072 | 1:28,347,614-28,348,162 | - | - | - | LOC_Os01g55160 | Os01g0756300 | - | Detail |
| CX1g003911 | 1:28,353,190-28,363,008 | - | C1H1g02918 | C2H1g30168 | LOC_Os01g55170 | Os01g0756400 | - | Detail |
| CX1g003221 | 1:28,368,555-28,372,068 | + | C1H1g08295 | C2H1g05126 | LOC_Os01g55190 | Os01g0531400 | - | Detail |
| CX1g002081 | 1:28,381,875-28,384,168 | + | C1H1g21813 | C2H1g22597 | LOC_Os01g55200 | Os01g0756700 | KAT1, OsKAT1 | Detail |
| CX1g004631 | 1:28,387,270-28,387,656 | + | - | - | - | Os01g0756900 | - | Detail |
| CX1g004140 | 1:28,402,436-28,404,204 | + | C1H1g15032 | C2H1g23299 | LOC_Os01g55240 | Os01g0757200 | GA2OX3, OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3 | Detail |
| CX1g001582 | 1:28,406,011-28,406,184 | + | - | - | - | - | - | Detail |
| CX1g001542 | 1:28,418,785-28,422,523 | + | C1H1g13228 | C2H1g18562 | LOC_Os01g55260 | Os01g0757400 | - | Detail |
| CX1g000631 | 1:28,423,175-28,425,965 | - | C1H1g20677 | C2H1g15915 | LOC_Os01g55270 | Os01g0757500 | - | Detail |
| CX1g004257 | 1:28,432,705-28,434,020 | - | C1H1g01435 | C2H1g24400 | LOC_Os01g55280 | Os01g0757600 | - | Detail |
| CX1g006495 | 1:28,442,928-28,446,633 | - | C1H1g01756 | C2H1g24899 | LOC_Os01g55290 | Os01g0757700 | - | Detail |
| CX1g003762 | 1:28,446,795-28,451,730 | + | C1H1g09106 | C2H1g22215 | LOC_Os01g55300 | Os01g0757800 | - | Detail |
| CX1g005426 | 1:28,452,490-28,455,625 | - | C1H1g06019 | C2H1g22679 | LOC_Os01g55310 | Os01g0757900 | - | Detail |
| CX1g002989 | 1:28,456,897-28,457,573 | - | C1H1g04207 | C2H1g13025 | LOC_Os01g55320 | Os01g0758000 | - | Detail |
| CX1g000088 | 1:28,458,537-28,458,692 | + | - | - | LOC_Os01g54280 | Os01g0930300 | - | Detail |
| CX1g007259 | 1:28,469,629-28,469,868 | - | - | - | - | - | - | Detail |
| CX1g006023 | 1:28,476,102-28,481,422 | - | C1H1g13262 | C2H1g30086 | LOC_Os01g55350 | Os01g0758300 | - | Detail |