| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17293 | 2:27,900,854-27,904,879 | + | C2H2g29055 | CX2g020148 | LOC_Os02g49770 | Os02g0730400 | - | Detail |
| C1H2g27973 | 2:27,906,024-27,907,425 | - | C2H2g02843 | CX2g021412 | LOC_Os02g49780 | Os02g0730500 | - | Detail |
| C1H2g19216 | 2:27,908,539-27,911,038 | + | C2H2g05336 | CX2g024911 | LOC_Os02g49790 | Os02g0730600 | - | Detail |
| C1H2g31196 | 2:27,911,459-27,914,905 | - | C2H2g23383 | CX2g022531 | LOC_Os02g49800 | Os02g0730700 | - | Detail |
| C1H2g13861 | 2:27,917,168-27,920,261 | + | C2H2g19263 | CX2g023418 | LOC_Os02g49820 | Os02g0730800 | - | Detail |
| C1H2g08098 | 2:27,932,922-27,938,800 | + | C2H2g21462 | CX2g022148 | LOC_Os02g49840 | Os02g0731200 | OsMADS57 | Detail |
| C1H2g22689 | 2:27,948,351-27,948,869 | + | C2H2g03897 | CX2g020726 | LOC_Os02g49850 | Os02g0731400 | - | Detail |
| C1H2g07036 | 2:27,949,532-27,950,463 | - | C2H2g25341 | CX2g021129 | LOC_Os02g49860 | Os02g0731500 | - | Detail |
| C1H2g04869 | 2:27,952,489-27,953,521 | + | C2H2g19830 | CX2g023460 | LOC_Os02g49870 | Os02g0731600 | - | Detail |
| C1H2g00972 | 2:27,954,086-27,956,129 | - | C2H2g14461 | CX2g020051 | LOC_Os02g49880 | Os02g0731700 | OsK, Ghd2 | Detail |
| C1H2g22578 | 2:27,984,726-27,989,321 | + | C2H2g12585 | CX2g022879 | LOC_Os02g49950 | Os02g0732200 | - | Detail |
| C1H2g08019 | 2:27,991,526-27,992,302 | + | C2H2g26422 | - | LOC_Os02g49960 | Os02g0732300 | - | Detail |
| C1H2g28110 | 2:27,995,504-27,996,621 | + | C2H2g20922 | CX2g019464 | LOC_Os02g49970 | Os02g0732400 | - | Detail |
| C1H2g10850 | 2:27,999,900-28,002,662 | - | C2H2g17194 | CX2g023132 | LOC_Os02g49980 | Os02g0732500 | - | Detail |
| C1H2g05502 | 2:28,006,210-28,007,224 | - | C2H2g26612 | CX2g021353 | LOC_Os02g49986 | Os02g0732600 | Os2R_MYB30 | Detail |
| C1H2g24742 | 2:28,008,386-28,019,858 | - | C2H2g25135 | CX2g020946 | LOC_Os02g49992 | Os02g0732700 | - | Detail |
| C1H2g27424 | 2:28,020,861-28,022,456 | - | C2H2g26888 | CX2g023389 | LOC_Os02g50000 | Os02g0732800 | - | Detail |
| C1H2g26386 | 2:28,023,764-28,027,117 | + | C2H2g07391 | CX2g020808 | LOC_Os02g50010 | Os02g0732900 | - | Detail |
| C1H2g27002 | 2:28,027,434-28,029,522 | - | C2H2g23355 | CX2g019891 | LOC_Os02g50020 | Os02g0733001 | - | Detail |
| C1H2g31248 | 2:28,036,876-28,039,960 | + | C2H2g17859 | CX2g019255 | LOC_Os02g50040 | Os02g0733300 | OsGH9B1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003778 | 1:28,332,108-28,332,320 | - | - | - | - | - | - | Detail |
| CX1g005575 | 1:28,333,146-28,335,655 | - | C1H1g10544 | C2H1g26286 | LOC_Os01g55120 | Os01g0756000 | - | Detail |
| CX1g006243 | 1:28,343,333-28,345,424 | + | C1H1g21888 | C2H1g27103 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| CX1g001072 | 1:28,347,614-28,348,162 | - | - | - | LOC_Os01g55160 | Os01g0756300 | - | Detail |
| CX1g003911 | 1:28,353,190-28,363,008 | - | C1H1g02918 | C2H1g30168 | LOC_Os01g55170 | Os01g0756400 | - | Detail |
| CX1g003221 | 1:28,368,555-28,372,068 | + | C1H1g08295 | C2H1g05126 | LOC_Os01g55190 | Os01g0531400 | - | Detail |
| CX1g002081 | 1:28,381,875-28,384,168 | + | C1H1g21813 | C2H1g22597 | LOC_Os01g55200 | Os01g0756700 | KAT1, OsKAT1 | Detail |
| CX1g004631 | 1:28,387,270-28,387,656 | + | - | - | - | Os01g0756900 | - | Detail |
| CX1g004140 | 1:28,402,436-28,404,204 | + | C1H1g15032 | C2H1g23299 | LOC_Os01g55240 | Os01g0757200 | GA2OX3, OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3 | Detail |
| CX1g001582 | 1:28,406,011-28,406,184 | + | - | - | - | - | - | Detail |
| CX1g001542 | 1:28,418,785-28,422,523 | + | C1H1g13228 | C2H1g18562 | LOC_Os01g55260 | Os01g0757400 | - | Detail |
| CX1g000631 | 1:28,423,175-28,425,965 | - | C1H1g20677 | C2H1g15915 | LOC_Os01g55270 | Os01g0757500 | - | Detail |
| CX1g004257 | 1:28,432,705-28,434,020 | - | C1H1g01435 | C2H1g24400 | LOC_Os01g55280 | Os01g0757600 | - | Detail |
| CX1g006495 | 1:28,442,928-28,446,633 | - | C1H1g01756 | C2H1g24899 | LOC_Os01g55290 | Os01g0757700 | - | Detail |
| CX1g003762 | 1:28,446,795-28,451,730 | + | C1H1g09106 | C2H1g22215 | LOC_Os01g55300 | Os01g0757800 | - | Detail |
| CX1g005426 | 1:28,452,490-28,455,625 | - | C1H1g06019 | C2H1g22679 | LOC_Os01g55310 | Os01g0757900 | - | Detail |
| CX1g002989 | 1:28,456,897-28,457,573 | - | C1H1g04207 | C2H1g13025 | LOC_Os01g55320 | Os01g0758000 | - | Detail |
| CX1g000088 | 1:28,458,537-28,458,692 | + | - | - | LOC_Os01g54280 | Os01g0930300 | - | Detail |
| CX1g007259 | 1:28,469,629-28,469,868 | - | - | - | - | - | - | Detail |
| CX1g006023 | 1:28,476,102-28,481,422 | - | C1H1g13262 | C2H1g30086 | LOC_Os01g55350 | Os01g0758300 | - | Detail |