| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g15991 | 2:3,199,232-3,201,157 | - | C2H2g19465 | CX2g019496 | LOC_Os02g07160 | Os02g0168100 | OsHPPD | Detail |
| C1H2g12427 | 2:3,204,214-3,204,806 | - | C2H2g21644 | CX2g021826 | LOC_Os02g07170 | Os02g0168200 | - | Detail |
| C1H2g27005 | 2:3,209,293-3,212,188 | + | C2H2g14957 | CX2g022739 | LOC_Os02g07180 | Os02g0168300 | - | Detail |
| C1H2g17697 | 2:3,216,393-3,221,516 | + | C2H2g15308 | CX2g023861 | LOC_Os02g07190 | Os02g0168400 | - | Detail |
| C1H2g15097 | 2:3,224,870-3,226,195 | + | C2H2g27598 | CX2g019993 | LOC_Os02g07200 | Os02g0168500 | - | Detail |
| C1H2g02992 | 2:3,227,323-3,229,979 | - | C2H2g30613 | CX2g020274 | LOC_Os02g07210 | Os02g0168600 | - | Detail |
| C1H2g24249 | 2:3,232,760-3,234,675 | - | C2H2g22535 | CX2g022989 | LOC_Os02g07220 | Os02g0168700 | - | Detail |
| C1H2g16743 | 2:3,235,605-3,238,520 | + | C2H2g29143 | CX2g019641 | LOC_Os02g07230 | Os02g0168800 | - | Detail |
| C1H2g05199 | 2:3,239,066-3,240,376 | - | C2H2g05298 | CX2g023253 | LOC_Os02g07240 | Os02g0168900 | - | Detail |
| C1H2g08763 | 2:3,241,208-3,244,905 | - | C2H2g28592 | CX2g023357 | LOC_Os02g07250 | Os02g0169000 | - | Detail |
| C1H2g16238 | 2:3,248,057-3,251,828 | + | C2H2g19444 | CX2g020247 | LOC_Os02g07260 | Os02g0169300 | - | Detail |
| C1H2g08697 | 2:3,259,911-3,268,968 | - | C2H2g02121 | CX2g023065 | LOC_Os02g07310 | Os02g0169400 | OsAGO17 | Detail |
| C1H2g13885 | 2:3,281,863-3,285,555 | + | C2H2g06608 | CX6g043108 | LOC_Os02g07330 | Os02g0169700 | - | Detail |
| C1H2g04805 | 2:3,287,984-3,301,446 | + | C2H2g01264 | CX2g022837 | LOC_Os02g07340 | Os02g0169800 | - | Detail |
| C1H2g14236 | 2:3,302,407-3,306,269 | - | C2H2g22477 | CX2g022025 | LOC_Os02g07350 | Os02g0169900 | - | Detail |
| C1H2g12408 | 2:3,307,268-3,312,967 | + | C2H2g09938 | CX2g019659 | LOC_Os02g07360 | Os02g0565400 | - | Detail |
| C1H2g30375 | 2:3,313,142-3,314,918 | + | C2H2g21866 | CX6g043108 | LOC_Os02g07410 | Os02g0170100 | - | Detail |
| C1H2g28383 | 2:3,315,776-3,317,326 | - | C2H2g02927 | - | LOC_Os02g07420 | Os02g0170200 | - | Detail |
| C1H2g02120 | 2:3,319,591-3,320,354 | - | C2H2g25691 | CX2g020746 | LOC_Os02g07430 | Os02g0170300 | MADS29, OsMADS29 | Detail |
| C1H2g03281 | 2:3,323,144-3,323,712 | - | C2H2g25691 | CX2g020746 | LOC_Os02g07430 | Os02g0170300 | MADS29, OsMADS29 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g052684 | 8:6,070,958-6,071,263 | - | - | C2H8g02057 | - | - | - | Detail |
| CX8g052647 | 8:6,080,275-6,088,032 | + | C1H8g14253 | C2H8g25187 | - | Os08g0223900 | OsOSC12/OsPTS1, OsOSC12, OsPTS1 | Detail |
| CX8g054084 | 8:6,088,165-6,091,405 | - | C1H8g11911 | C2H8g14764 | LOC_Os08g12740 | Os08g0224000 | - | Detail |
| CX8g053386 | 8:6,094,707-6,098,420 | + | C1H8g03535 | C2H8g05725 | LOC_Os08g12750 | Os08g0224100 | - | Detail |
| CX8g050738 | 8:6,099,677-6,103,236 | - | C1H8g09432 | C2H8g25932 | LOC_Os08g12760 | Os08g0224200 | - | Detail |
| CX8g052190 | 8:6,115,397-6,119,462 | - | C1H8g13554 | C2H8g14168 | LOC_Os08g12780 | Os08g0224300 | ARE1, OsARE1 | Detail |
| CX8g054167 | 8:6,126,546-6,130,721 | + | C1H8g13808 | C2H8g26697 | LOC_Os08g12800 | Os08g0224500 | - | Detail |
| CX8g052940 | 8:6,135,725-6,140,949 | + | C1H8g18116 | C2H8g28213 | LOC_Os08g12820 | Os08g0224700 | - | Detail |
| CX8g054638 | 8:6,141,878-6,142,189 | + | - | - | - | - | - | Detail |
| CX8g053707 | 8:6,149,310-6,152,070 | + | C1H8g20149 | C2H8g29095 | LOC_Os08g12830 | Os08g0224800 | - | Detail |
| CX8g050839 | 8:6,154,796-6,157,159 | - | C1H8g10159 | C2H8g07408 | LOC_Os08g12840 | Os08g0225000 | ZL16, OsHAD1 | Detail |
| CX8g053397 | 8:6,157,698-6,158,465 | - | C1H8g01816 | C2H8g19330 | - | - | - | Detail |
| CX8g052773 | 8:6,161,151-6,165,706 | - | C1H8g25010 | C2H8g04092 | LOC_Os08g12850 | Os08g0225100 | - | Detail |
| CX8g050647 | 8:6,171,041-6,172,578 | - | C1H10g03670 | - | LOC_Os04g20730 | Os08g0324600 | - | Detail |
| CX8g054218 | 8:6,181,209-6,181,412 | - | - | - | - | - | - | Detail |
| CX8g053641 | 8:6,184,999-6,185,385 | + | C1H8g00577 | C2H8g09739 | - | - | - | Detail |
| CX8g051008 | 8:6,186,757-6,190,960 | - | - | - | - | - | - | Detail |
| CX8g054579 | 8:6,197,660-6,198,286 | + | - | - | - | - | - | Detail |
| CX8g051065 | 8:6,206,261-6,207,157 | + | C1H8g02527 | C2H8g19478 | - | - | - | Detail |
| CX8g053607 | 8:6,217,694-6,218,137 | + | C1H8g01676 | C2H8g30659 | - | - | - | Detail |