| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g05149 | 9:3,355,400-3,358,758 | - | C2H9g26775 | CX9g057493 | LOC_Os09g07290 | Os09g0247600 | - | Detail |
| C1H9g03723 | 9:3,359,959-3,371,828 | - | C2H9g13808 | CX9g056792 | LOC_Os09g07294 | Os09g0247700 | BIG, OsBIG | Detail |
| C1H9g11490 | 9:3,378,227-3,381,174 | - | C2H9g13808 | CX9g056792 | LOC_Os09g07300 | Os09g0247700 | BIG, OsBIG | Detail |
| C1H9g01018 | 9:3,402,047-3,412,589 | + | C2H9g09397 | CX9g057562 | LOC_Os09g07320 | Os09g0248000 | - | Detail |
| C1H9g06797 | 9:3,418,756-3,424,766 | - | C2H9g08473 | - | - | - | - | Detail |
| C1H9g24946 | 9:3,433,791-3,437,565 | + | C2H9g28802 | CX9g055193 | LOC_Os09g07350 | Os09g0248100 | - | Detail |
| C1H9g15667 | 9:3,439,645-3,444,601 | - | C2H9g10868 | CX9g057457 | LOC_Os09g07360 | Os09g0248200 | - | Detail |
| C1H9g15803 | 9:3,448,014-3,453,382 | - | C2H9g03673 | CX9g057457 | LOC_Os09g07380 | Os09g0248300 | - | Detail |
| C1H9g14985 | 9:3,458,318-3,465,087 | - | C2H9g23086 | CX9g055027 | LOC_Os09g07020 | Os09g0245500 | - | Detail |
| C1H9g18619 | 9:3,468,255-3,468,566 | - | C2H9g02331 | - | - | - | - | Detail |
| C1H9g27878 | 9:3,472,056-3,475,806 | - | C2H9g06448 | CX9g057597 | LOC_Os09g07460 | Os09g0249000 | - | Detail |
| C1H9g24582 | 9:3,484,763-3,488,909 | + | C2H9g20745 | CX9g056442 | LOC_Os09g07480 | Os09g0249400 | - | Detail |
| C1H9g20835 | 9:3,490,492-3,494,584 | - | C2H9g06831 | CX9g058158 | LOC_Os09g07500 | Os09g0249600 | - | Detail |
| C1H9g20701 | 9:3,497,821-3,504,198 | - | C2H9g07458 | CX9g054955 | LOC_Os09g07510 | Os09g0249700 | - | Detail |
| C1H9g00474 | 9:3,511,637-3,515,537 | + | C2H9g12303 | CX9g057433 | LOC_Os09g07570 | Os09g0249900 | - | Detail |
| C1H9g08915 | 9:3,516,592-3,525,306 | - | C2H9g13423 | CX9g058038 | LOC_Os09g07590 | Os09g0357400 | - | Detail |
| C1H9g03739 | 9:3,551,523-3,551,803 | - | - | - | LOC_Os09g07614 | - | - | Detail |
| C1H9g11366 | 9:3,551,920-3,553,207 | - | C2H9g30220 | - | - | - | - | Detail |
| C1H9g03513 | 9:3,563,746-3,578,619 | + | C2H9g19501 | CX9g055768 | LOC_Os03g06900 | Os09g0500600 | - | Detail |
| C1H9g17448 | 9:3,585,554-3,593,370 | + | C2H9g12401 | CX9g056142 | LOC_Os09g07660 | Os09g0250700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g051736 | 8:4,508,773-4,510,425 | + | C1H8g17867 | C2H8g30290 | LOC_Os08g09340 | Os08g0192800 | - | Detail |
| CX8g050572 | 8:4,512,696-4,516,856 | - | C1H8g06439 | C2H8g22719 | LOC_Os08g09350 | Os08g0192900 | - | Detail |
| CX8g053323 | 8:4,526,782-4,528,401 | - | - | - | LOC_Os08g09360 | Os08g0193000 | - | Detail |
| CX8g054398 | 8:4,530,479-4,534,536 | + | C1H8g20802 | C2H8g26778 | LOC_Os08g09370 | Os08g0193100 | OsSPS4 | Detail |
| CX8g050681 | 8:4,551,428-4,554,201 | + | C1H8g16197 | C2H8g03394 | LOC_Os08g09450 | Os08g0193900 | - | Detail |
| CX8g053997 | 8:4,557,421-4,560,357 | - | C1H8g29041 | C2H8g17617 | LOC_Os08g09430 | Os08g0193700 | - | Detail |
| CX8g052446 | 8:4,622,865-4,624,965 | + | C1H8g21908 | C2H8g26516 | LOC_Os08g09570 | Os08g0194900 | - | Detail |
| CX8g054397 | 8:4,628,208-4,628,375 | + | - | - | - | - | - | Detail |
| CX8g054585 | 8:4,629,574-4,632,252 | + | C1H8g14744 | C2H8g12506 | LOC_Os08g09590 | Os08g0195000 | - | Detail |
| CX8g053492 | 8:4,637,502-4,638,470 | + | C1H8g05844 | C2H8g08097 | LOC_Os08g09600 | Os08g0191300 | - | Detail |
| CX8g054571 | 8:4,696,033-4,697,866 | + | C1H8g12615 | C2H8g18046 | LOC_Os08g09690 | Os08g0196700 | HAP2A, OsHAP2A, NF-YA, CBF-B, NF-YA7, OsNF-YA7 | Detail |
| CX8g051043 | 8:4,708,042-4,719,113 | + | C1H8g01088 | C2H8g03656 | LOC_Os08g09710 | Os08g0197050 | - | Detail |
| CX8g053857 | 8:4,749,226-4,751,226 | - | C1H8g30255 | C2H5g26795 | LOC_Os08g09770 | Os08g0197700 | OsBiP5 | Detail |
| CX8g054342 | 8:4,764,482-4,769,873 | - | C1H8g26667 | C2H8g22386 | LOC_Os08g09800 | Os08g0198000 | - | Detail |
| CX8g054732 | 8:4,776,494-4,779,242 | + | - | - | - | - | - | Detail |
| CX8g051609 | 8:4,787,144-4,796,536 | - | C1H8g26667 | C2H8g22386 | LOC_Os08g09810 | Os08g0198000 | - | Detail |
| CX8g053051 | 8:4,812,148-4,813,179 | + | C1H8g23392 | C2H8g25311 | LOC_Os08g09830 | Os08g0198300 | - | Detail |
| CX8g053236 | 8:4,824,670-4,828,178 | - | C1H8g11892 | C2H8g01543 | LOC_Os08g09900 | Os08g0198000 | - | Detail |
| CX8g054818 | 8:4,829,087-4,829,350 | - | C1H8g11892 | - | - | Os08g0198900 | - | Detail |
| CX8g051012 | 8:4,830,681-4,839,154 | + | C1H8g14317 | C2H8g15525 | LOC_Os08g09910 | Os08g0199000 | - | Detail |